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64_010_scaffold_160

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_160_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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294..986
DNA (693bp) protein (231aa)
Transcriptional regulatory family protein n=207 Tax=Clostridium difficile RepID=C9XL82_CLODC
two-component system response regulator
Two-component response regulator {ECO:0000313|EMBL:CCL30512.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_160_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1182..3242
DNA (2061bp) protein (687aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
His Kinase A domain protein n=92 Tax=Clostridium difficile RepID=T2TD65_CLODI
two-component sensor histidine kinase
64_010_scaffold_160_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3448..3771)
DNA (324bp) protein (108aa)
Branched-chain amino acid transport protein n=191 Tax=Clostridium difficile RepID=G6BZ23_CLODI
hypothetical protein
Branched-chain amino acid transport family protein {ECO:0000313|EMBL:EQE62425.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_160_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3764..4465)
DNA (702bp) protein (234aa)
AzlC family protein n=187 Tax=Clostridium difficile RepID=C9XL79_CLODC
hypothetical protein
AzlC family protein {ECO:0000313|EMBL:EQE62426.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_160_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4743..6128)
DNA (1386bp) protein (462aa)
GntR-family transcriptional regulator n=123 Tax=Clostridium difficile RepID=C9XL78_CLODC
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCL30508.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_160_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6574..6996)
DNA (423bp) protein (141aa)
Uncharacterized protein n=188 Tax=Clostridium difficile RepID=C9XL76_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30505.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_160_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7091..7243)
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T3FIP8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS87684.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_160_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7474..10377
DNA (2904bp) protein (968aa)
AAA domain family protein n=36 Tax=Clostridium difficile RepID=T3GIH5_CLODC
Sigma-54 interacting transcription antiterminator {ECO:0000313|EMBL:CKH27291.1}; Transcription antiterminator, PTS operonregulator {ECO:0000313|EMBL:CEJ98892.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
sigma-54 interacting transcription antiterminator
64_010_scaffold_160_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10410..10856
DNA (447bp) protein (149aa)
PTS system transporter subunit IIBC; K02773 PTS system, galactitol-specific IIA component [EC:2.7.1.69]
PTS system, IIbc component n=151 Tax=Clostridium difficile RepID=C9XL74_CLODC
PTS system, fructose/mannitol family IIA component {ECO:0000313|EMBL:CCL22599.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_160_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10979..11281
DNA (303bp) protein (101aa)
PTS system transporter subunit IIB; K02774 PTS system, galactitol-specific IIB component [EC:2.7.1.69]
PTS system, Lactose/Cellobiose specific IIB subunit n=28 Tax=Clostridium difficile RepID=T3GFR2_CLODC
PTS system%2C IIb component {ECO:0000313|EMBL:CKH27215.1}; PTS system, fructose/mannitol family IIBcomponent {ECO:0000313|EMBL:CEJ98890.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_160_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11462..12868
DNA (1407bp) protein (469aa)
PTS system sugar-specific permease component family protein n=145 Tax=Clostridium difficile RepID=T3GGU0_CLODC
PTS system transporter subunit IIC; K02775 PTS system, galactitol-specific IIC component
PTS system, fructose/mannitol family IIC component {ECO:0000313|EMBL:CCL22597.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_160_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13212..14270
DNA (1059bp) protein (353aa)
Putative sugar-phosphate dehydrogenase {ECO:0000313|EMBL:CAJ69163.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAJ69163.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Zinc-binding dehydrogenase family protein n=37 Tax=Clostridium difficile RepID=T3GII0_CLODC
sugar dehydrogenase
64_010_scaffold_160_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14369..15055
DNA (687bp) protein (229aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4); K03077 L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EQE62437.1}; EC=5.1.3.4 {ECO:0000313|EMBL:EQE62437.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L-ribulose-5-phosphate 4-epimerase n=172 Tax=Clostridium difficile RepID=T3GII6_CLODC
64_010_scaffold_160_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15073..15720
DNA (648bp) protein (216aa)
Class II aldolase {ECO:0000313|EMBL:CAJ69161.1}; EC=4.1.2.17 {ECO:0000313|EMBL:CAJ69161.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Class II Aldolase and Adducin N-terminal domain protein n=29 Tax=Clostridium difficile RepID=T3GKW3_CLODC
sugar phosphate aldolase
64_010_scaffold_160_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15893..17260)
DNA (1368bp) protein (456aa)
Amino acid carrier family protein n=167 Tax=Clostridium difficile RepID=T3GK66_CLODC
sodium:solute symporter; K03310 alanine or glycine:cation symporter, AGCS family
Amino acid carrier family protein {ECO:0000313|EMBL:EQI81628.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
64_010_scaffold_160_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17966..20086
DNA (2121bp) protein (707aa)
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
DNA topoisomerase n=47 Tax=Clostridium difficile RepID=T3GK72_CLODC
64_010_scaffold_160_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20190..21443
DNA (1254bp) protein (418aa)
Uncharacterized protein n=89 Tax=Clostridium difficile RepID=Q185E6_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE62450.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_160_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21597..22658)
DNA (1062bp) protein (354aa)
Sporulation integral membrane protein YtvI n=186 Tax=Clostridium difficile RepID=G6BZ06_CLODI
hypothetical protein
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EQH99078.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_010_scaffold_160_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22932..23672
DNA (741bp) protein (247aa)
hypothetical protein; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Tyrosine phosphatase family protein n=157 Tax=Clostridium difficile RepID=C9XL64_CLODC
Uncharacterized protein {ECO:0000313|EMBL:CCL30492.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_160_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23684..25462
DNA (1779bp) protein (593aa)
Transcription antiterminator, PTS operon regulator n=73 Tax=Clostridium difficile RepID=Q185E2_CLOD6
transcription antiterminator
Putative transcriptional antiterminator {ECO:0000313|EMBL:CDS87655.1}; Transcription antiterminator {ECO:0000313|EMBL:CKH26916.1}; Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CDT13975.1}; Transcription antiterminator, PTS operonregulator {ECO:0000313|EMBL:CEJ98880.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_160_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25629..26546
DNA (918bp) protein (306aa)
fruK; 1-phosphofructokinase (EC:2.7.1.56); K00882 1-phosphofructokinase [EC:2.7.1.56]
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Tagatose-6-phosphate kinase n=6 Tax=Clostridium difficile RepID=T3GIK8_CLODC
64_010_scaffold_160_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26583..28502
DNA (1920bp) protein (640aa)
PTS system transporter subunit IIBC; K02768 PTS system, fructose-specific IIA component [EC:2.7.1.69]; K02769 PTS system, fructose-specific IIB component [EC:2.7.1.69]; K02770 PTS system, fructose-specific IIC component
PTS system transporter subunit IIBC {ECO:0000313|EMBL:CKH26864.1}; PTS system, fructose-specific IIABC component {ECO:0000313|EMBL:CDS85734.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDS85734.1};; Phosphotransferase system (PTS) fructose-specific enzyme IIABC component {ECO:0000313|EMBL:CDS87650.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDS87650.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
PTS system, fructose subfamily, IIA component domain protein n=62 Tax=Clostridium difficile RepID=T3GKX7_CLODC
64_010_scaffold_160_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28996..30003
DNA (1008bp) protein (336aa)
CAAX amino terminal protease family protein n=4 Tax=Clostridium difficile RepID=D5Q334_CLODI
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFH07707.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
membrane-associated caaX amino terminal protease
64_010_scaffold_160_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30383..31909
DNA (1527bp) protein (509aa)
FAD binding domain protein n=43 Tax=Clostridium difficile RepID=T3GFY5_CLODC
Putative oxidoreductase, FAD dependent {ECO:0000313|EMBL:CAJ69151.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
oxidoreductase
64_010_scaffold_160_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31937..32494
DNA (558bp) protein (186aa)
Uncharacterized protein n=158 Tax=Clostridium difficile RepID=G6BZ00_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CEJ98875.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_160_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33016..34059
DNA (1044bp) protein (348aa)
Uncharacterized protein n=50 Tax=Clostridium difficile RepID=T3GL23_CLODC
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH26714.1}; Uncharacterized protein {ECO:0000313|EMBL:CDT14029.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_160_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34170..35312
DNA (1143bp) protein (381aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
PPIC-type PPIASE domain protein n=48 Tax=Clostridium difficile RepID=T3GKE1_CLODC
protein export chaperone
64_010_scaffold_160_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35766..37157
DNA (1392bp) protein (464aa)
H+ symporter family protein n=207 Tax=Clostridium difficile RepID=C9XL55_CLODC
proton-dependent oligopeptide transporter
H+ symporter family protein {ECO:0000313|EMBL:EQH99069.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_010_scaffold_160_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37410..39203
DNA (1794bp) protein (598aa)
peptidase; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Metallopeptidase M24 family protein n=123 Tax=Clostridium difficile RepID=T3GH21_CLODC
Putative peptidase, M24 family {ECO:0000313|EMBL:CAJ69146.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_160_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39284..40666)
DNA (1383bp) protein (461aa)
H+ symporter family protein n=61 Tax=Clostridium difficile RepID=T3GIR7_CLODC
proton-dependent oligopeptide transporter
Proton-dependent oligopeptide transporter {ECO:0000313|EMBL:CKH26595.1}; Transporter, Major Facilitator Superfamily(MFS) {ECO:0000313|EMBL:CEJ98870.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Displaying items 1-30 of 38 in total

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