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64_010_scaffold_176

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_176_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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479..4024
DNA (3546bp) protein (1182aa)
Signaling protein {ECO:0000313|EMBL:CKG90656.1}; EC=3.1.4.52 {ECO:0000313|EMBL:CKG90656.1};; Two-component sensor histidine kinase {ECO:0000313|EMBL:CEJ97555.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Diguanylate cyclase domain protein n=7 Tax=Clostridium difficile RepID=T3I3X1_CLODC
signaling protein
64_010_scaffold_176_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4209..6143
DNA (1935bp) protein (645aa)
UPF0313 protein QGC_0860 n=137 Tax=Clostridium difficile RepID=T3I528_CLODC
hypothetical protein
Putative iron-sulfur protein {ECO:0000313|EMBL:CAJ67839.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_176_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6249..7244
DNA (996bp) protein (332aa)
Menaquinone biosynthesis family protein n=26 Tax=Clostridium difficile RepID=T3I1W9_CLODC
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CKG90740.1}; ABC-type transportsystem,nitrate/sulfonate/taurine extracellularsolute-binding protein {ECO:0000313|EMBL:CEJ97557.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_176_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7216..8001
DNA (786bp) protein (262aa)
ABC transporter, permease protein n=164 Tax=Clostridium difficile RepID=C9XMF3_CLODC
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQE67919.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_176_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7989..8687
DNA (699bp) protein (233aa)
ABC transporter family protein n=165 Tax=Clostridium difficile RepID=C9XMF4_CLODC
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:EQG78193.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_176_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8810..9283
DNA (474bp) protein (158aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=185 Tax=Clostridium difficile RepID=C9XMF5_CLODC
regulatory protein; K03976 putative transcription regulator
64_010_scaffold_176_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9480..10319
DNA (840bp) protein (280aa)
fumA; fumarate hydratase; K01677 fumarate hydratase subunit alpha [EC:4.2.1.2]
Fumarate hydratase class I, subunit A {ECO:0000313|EMBL:CCL21095.1}; EC=4.2.1.2 {ECO:0000313|EMBL:CCL21095.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Fumarate hydratase, subunit A n=167 Tax=Clostridium difficile RepID=C9XMF6_CLODC
64_010_scaffold_176_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10332..10880
DNA (549bp) protein (183aa)
fumB; fumarate hydratase subunit B; K01678 fumarate hydratase subunit beta [EC:4.2.1.2]
Hydrolyase, tartrate beta subunit/fumarate, Fe-S type domain protein n=211 Tax=Clostridium difficile RepID=C9XMF7_CLODC
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EHJ31046.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_010_scaffold_176_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10946..12127
DNA (1182bp) protein (394aa)
NAD-dependent malic enzyme (EC:1.1.1.38); K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
Putative NAD-dependent malic enzyme {ECO:0000313|EMBL:CAJ67846.1}; EC=1.1.1.38 {ECO:0000313|EMBL:CAJ67846.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Malic enzyme, NAD binding domain protein n=77 Tax=Clostridium difficile RepID=T3I3V2_CLODC
64_010_scaffold_176_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12419..12808
DNA (390bp) protein (130aa)
Acetyltransferase family protein n=70 Tax=Clostridium difficile RepID=T3I508_CLODC
acetyltransferase
Putative acyl-CoA N-acyltransferase {ECO:0000313|EMBL:CAJ67847.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_176_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12958..13221
DNA (264bp) protein (88aa)
Uncharacterized protein n=193 Tax=Clostridium difficile RepID=C9YJV9_CLODR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL28966.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_176_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13350..14192)
DNA (843bp) protein (281aa)
S1 domain protein n=34 Tax=Clostridium difficile RepID=C9XMG4_CLODC
hypothetical protein; K00243 hypothetical protein
S1 rna binding domain protein {ECO:0000313|EMBL:CAJ67849.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_176_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14487..15221
DNA (735bp) protein (245aa)
Bacterial regulatory s, gntR family protein n=169 Tax=Clostridium difficile RepID=C9XMG5_CLODC
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCL29027.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_176_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15231..16364
DNA (1134bp) protein (378aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
N-acetylglucosamine-6-phosphate deacetylase n=48 Tax=Clostridium difficile RepID=T3I1N2_CLODC
64_010_scaffold_176_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16463..17212
DNA (750bp) protein (250aa)
glmD; glucosamine-6-phosphate deaminase (EC:3.5.99.6); K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6]
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Glucosamine-6-phosphate deaminase n=184 Tax=Clostridium difficile RepID=NAGB_CLOD6
64_010_scaffold_176_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17344..17763)
DNA (420bp) protein (140aa)
Uncharacterized protein n=139 Tax=Clostridium difficile RepID=G6BUJ2_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAJ67853.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_176_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18319..19023
DNA (705bp) protein (235aa)
Response regulator n=161 Tax=Clostridium difficile RepID=T3I4Q3_CLODC
two-component system response regulator
Response regulator {ECO:0000313|EMBL:EQG78203.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_176_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19025..20512
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CKG91151.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
His Kinase A domain protein n=75 Tax=Clostridium difficile RepID=T3I1J3_CLODC
two-component system sensor histidine kinase
64_010_scaffold_176_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20717..22330
DNA (1614bp) protein (538aa)
Signaling protein {ECO:0000313|EMBL:CKG91227.1}; EC=3.1.4.52 {ECO:0000313|EMBL:CKG91227.1};; Two-component sensor histidine kinase {ECO:0000313|EMBL:CEJ97573.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Two-component sensor histidine kinase n=167 Tax=Clostridium difficile RepID=Q18AL7_CLOD6
signaling protein
64_010_scaffold_176_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22693..23523)
DNA (831bp) protein (277aa)
MerR regulatory family protein n=60 Tax=Clostridium difficile RepID=T3I1D6_CLODC
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCL21109.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_176_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23596..25323
DNA (1728bp) protein (576aa)
ABC transporter ATP-binding protein/permease {ECO:0000313|EMBL:CKG91278.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKG91278.1};; ABC-type transport system, multidrug-familyATP-binding protein/permease {ECO:0000313|EMBL:CEJ97575.1}; EC=3.6.3.- {ECO:0000313|EMBL:CEJ97575.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC transporter family protein n=53 Tax=Clostridium difficile RepID=T3HZP0_CLODC
ABC transporter permease/ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
64_010_scaffold_176_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25360..27222
DNA (1863bp) protein (621aa)
ABC-type transport system, multidrug-family ATP-binding protein/permease {ECO:0000313|EMBL:CAJ67859.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ67859.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
ABC transporter family protein n=5 Tax=Clostridium difficile RepID=T3HYH2_CLODC
ABC transporter permease/ATP-binding protein
64_010_scaffold_176_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27555..28244
DNA (690bp) protein (230aa)
Uncharacterized protein n=70 Tax=Clostridium difficile RepID=Q18AM2_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL21112.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_176_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28361..29035
DNA (675bp) protein (225aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=T3HYB3_CLODC
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CEJ97578.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_176_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29052..30959
DNA (1908bp) protein (636aa)
CotH family protein n=39 Tax=Clostridium difficile RepID=T3I378_CLODC
hypothetical protein
Inner spore coat protein H {ECO:0000313|EMBL:CKG91412.1}; Putative spore coat protein {ECO:0000313|EMBL:CEJ97579.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_176_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31412..32101
DNA (690bp) protein (230aa)
Uncharacterized protein n=57 Tax=Clostridium difficile RepID=T3HZC8_CLODC
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CEJ97580.1}; Uncharacterized BCR%2C YitT family COG1284 {ECO:0000313|EMBL:CKG91447.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_176_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32537..33076
DNA (540bp) protein (180aa)
Helix-turn-helix family protein n=220 Tax=Clostridium difficile RepID=C9XMH9_CLODC
transcriptional regulator
Putative transcriptional regulator, HTH {ECO:0000313|EMBL:CCL29043.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_176_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33095..34138
DNA (1044bp) protein (348aa)
potA; spermidine/putrescine ABC transporter ATP-binding protein; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31]
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Spermidine/putrescine import ATP-binding protein PotA n=202 Tax=Clostridium difficile RepID=POTA_CLOD6
64_010_scaffold_176_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34140..34976
DNA (837bp) protein (279aa)
Binding--dependent transport system inner membrane component family protein n=190 Tax=Clostridium difficile RepID=C9XMI1_CLODC
potB; spermidine/putrescine ABC transporter permease; K11071 spermidine/putrescine transport system permease protein
ABC-type transport system,spermidine/putrescine permease {ECO:0000313|EMBL:CCL29045.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_176_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35081..35755
DNA (675bp) protein (225aa)
ABC-type transport system,spermidine/putrescine permease n=194 Tax=Clostridium difficile RepID=Q18AM6_CLOD6
potC; spermidine/putrescine ABC transporter permease; K11070 spermidine/putrescine transport system permease protein
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQG78183.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Displaying items 1-30 of 38 in total

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