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64_010_scaffold_192

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_192_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..352
DNA (351bp) protein (117aa)
Hemagglutinin/adhesin {ECO:0000313|EMBL:CKH68728.1}; EC=3.5.1.28 {ECO:0000313|EMBL:CKH68728.1};; Putative hemagglutinin/adhesin cwpV {ECO:0000313|EMBL:CEJ97046.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Cell wall V domain protein n=1 Tax=Clostridium difficile CD42 RepID=T2XY27_CLODI
hemagglutinin/adhesin
64_010_scaffold_192_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(847..2091)
DNA (1245bp) protein (415aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Serine-type D-Ala-D-Ala carboxypeptidase n=34 Tax=Clostridium difficile RepID=G6BX62_CLODI
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CBE02232.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_010_scaffold_192_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2134..4968)
DNA (2835bp) protein (945aa)
Sigma-54 interaction domain protein n=43 Tax=Clostridium difficile RepID=T3IE05_CLODC
Transcription antiterminator {ECO:0000313|EMBL:CEJ97048.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
transcription antiterminator
64_010_scaffold_192_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5634..6431
DNA (798bp) protein (266aa)
Uncharacterized protein n=51 Tax=Clostridium difficile RepID=G6BX64_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE02236.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_010_scaffold_192_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6432..6926
DNA (495bp) protein (165aa)
Uncharacterized protein n=33 Tax=Clostridium difficile RepID=T3IDY8_CLODC
hypothetical protein
Membrane spanning protein {ECO:0000313|EMBL:CKH68613.1}; Putative membrane protein {ECO:0000313|EMBL:CEJ97050.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_192_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7152..8330
DNA (1179bp) protein (393aa)
Nucleoside recognition family protein n=125 Tax=Clostridium difficile RepID=T3ICM3_CLODC
hypothetical protein
Nucleoside recognition family protein {ECO:0000313|EMBL:EQE69549.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_192_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8584..10191
DNA (1608bp) protein (536aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
two-component sensor histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
His Kinase A domain protein n=193 Tax=Clostridium difficile RepID=C9XKG2_CLODC
64_010_scaffold_192_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10182..10886
DNA (705bp) protein (235aa)
Response regulator n=202 Tax=Clostridium difficile RepID=C9XKG3_CLODC
two-component response regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE
Two-component response regulator {ECO:0000313|EMBL:CDT25038.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_192_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10920..11033
DNA (114bp) protein (38aa)
Uncharacterized protein n=18 Tax=Clostridium difficile RepID=T2VW46_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQE69566.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_192_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11173..11367)
DNA (195bp) protein (65aa)
Putative membrane protein n=3 Tax=Clostridium difficile RepID=T2V0C3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ28337.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
64_010_scaffold_192_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12059..15157
DNA (3099bp) protein (1033aa)
Diguanylate cyclase domain protein n=24 Tax=Clostridium difficile RepID=T2U7H2_CLODI
Putative signaling protein {ECO:0000313|EMBL:CEJ97055.1}; Signaling protein {ECO:0000313|EMBL:CKH68464.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
signaling protein
64_010_scaffold_192_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15280..16566
DNA (1287bp) protein (429aa)
Uncharacterized protein n=167 Tax=Clostridium difficile RepID=T3IIF9_CLODC
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EQG77556.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_192_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16945..17955)
DNA (1011bp) protein (337aa)
Putative peptidase, M20 family {ECO:0000313|EMBL:CAJ67358.1}; EC=3.4.11.- {ECO:0000313|EMBL:CAJ67358.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
M42 glutamyl aminopeptidase family protein n=5 Tax=Clostridium difficile RepID=T2U4Z7_CLODI
peptidase
64_010_scaffold_192_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17990..19531)
DNA (1542bp) protein (514aa)
C4-dicarboxylate anaerobic carrier family protein n=145 Tax=Clostridium difficile RepID=T2TPM3_CLODI
aminobenzoyl-glutamate transport protein; K12942 aminobenzoyl-glutamate transport protein
Putative aminobenzoyl-glutamate transporter {ECO:0000313|EMBL:CBE02250.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_010_scaffold_192_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19893..20639)
DNA (747bp) protein (249aa)
Metallo-beta-lactamase domain protein n=12 Tax=Clostridium difficile RepID=G6BX74_CLODI
metallo-beta-lactamase superfamily hydrolase
Putative beta-lactamase-like hydrolase {ECO:0000313|EMBL:CAJ67360.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_192_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20851..22161)
DNA (1311bp) protein (437aa)
Amidohydrolase n=13 Tax=Clostridium difficile RepID=G6BX75_CLODI
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CKH68278.1}; Putative amidohydrolase {ECO:0000313|EMBL:CEJ97060.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_192_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22174..22644)
DNA (471bp) protein (157aa)
Uncharacterized protein n=213 Tax=Clostridium difficile RepID=D5Q0B8_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL00456.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
64_010_scaffold_192_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22648..23499)
DNA (852bp) protein (284aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=G6BX77_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL32275.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_192_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24246..25157
DNA (912bp) protein (304aa)
DeoR-family transcriptional regulator n=200 Tax=Clostridium difficile RepID=C9XKH2_CLODC
DeoR family transcriptional regulator
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:EQG77747.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_192_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25332..25829
DNA (498bp) protein (166aa)
GyrI-like small molecule binding domain protein n=43 Tax=Clostridium difficile RepID=T3IDE3_CLODC
hypothetical protein
AraC family transcriptional regulator {ECO:0000313|EMBL:CKH68156.1}; Putative transcriptional regulator {ECO:0000313|EMBL:CEJ97064.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_192_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26573..26935
DNA (363bp) protein (121aa)
Chemotaxis protein CheY n=138 Tax=Clostridium difficile RepID=T3IBT8_CLODC
cheB; chemotaxis protein; K03413 two-component system, chemotaxis family, response regulator CheY
Chemotaxis protein {ECO:0000313|EMBL:CKH68113.1}; Chemotaxis protein CheY {ECO:0000313|EMBL:CEJ97065.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_192_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27096..27617
DNA (522bp) protein (174aa)
Chemotaxis protein CheC {ECO:0000313|EMBL:CKH68058.1}; EC=3.-.-.- {ECO:0000313|EMBL:CKH68058.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Chemotaxis protein CheY-P phosphatase CheC n=6 Tax=Clostridium difficile RepID=Q188X8_CLOD6
cheC; chemotaxis protein CheC; K03410 chemotaxis protein CheC
64_010_scaffold_192_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27614..28099
DNA (486bp) protein (162aa)
cheD; chemotaxis protein; K03411 chemotaxis protein CheD [EC:3.5.1.44]
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Clostridium difficile CD69 RepID=T3AFB3_CLODI
64_010_scaffold_192_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28142..28660
DNA (519bp) protein (173aa)
CheW-like domain protein n=48 Tax=Clostridium difficile RepID=T3IEQ6_CLODC
cheW; chemotaxis protein; K03408 purine-binding chemotaxis protein CheW
Chemotaxis protein {ECO:0000313|EMBL:CKH67970.1}; Purine-binding chemotaxis protein CheW {ECO:0000313|EMBL:CEJ97068.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_192_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28796..29755
DNA (960bp) protein (320aa)
Diguanylate cyclase domain protein n=194 Tax=Clostridium difficile RepID=T3ID58_CLODC
chemosensory protein
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQG77763.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_192_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29781..31229
DNA (1449bp) protein (483aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=2 Tax=Clostridium difficile RepID=T3J906_CLODI
methyl accpeting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:EQG77946.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_192_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31353..31484
DNA (132bp) protein (44aa)
Methyl-accepting chemotaxis (MCP) signaling domain protein n=1 Tax=Clostridium difficile DA00145 RepID=T3PIP3_CLODI
methyl accpeting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
Methyl accpeting chemotaxis protein {ECO:0000313|EMBL:CKH67896.1}; Putative methyl-accepting chemotaxis receptor, MCP family {ECO:0000313|EMBL:CDT24853.1}; Putative methyl-accepting chemotaxis receptor,MCP family {ECO:0000313|EMBL:CDS83781.1}; Putative methyl-accepting chemotaxisreceptor,MCP family {ECO:0000313|EMBL:CEJ97070.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_192_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31667..33799
DNA (2133bp) protein (711aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
cheA; chemotaxis protein; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
Chemotaxis protein CheA n=37 Tax=Clostridium difficile RepID=U3YSD8_CLODI
64_010_scaffold_192_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33812..34252
DNA (441bp) protein (147aa)
CheW-like domain protein n=182 Tax=Clostridium difficile RepID=C9XKI1_CLODC
chemotaxis protein; K03408 purine-binding chemotaxis protein CheW
CheW-like domain protein {ECO:0000313|EMBL:EQG77706.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_192_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34288..35091
DNA (804bp) protein (268aa)
cheR; chemotaxis protein methyltransferase (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
Methyltransferase domain protein n=124 Tax=Clostridium difficile RepID=T3IER0_CLODC
CheR methyltransferase, SAM binding domain protein {ECO:0000313|EMBL:EHJ34816.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Displaying items 1-30 of 39 in total

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