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64_010_scaffold_226

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_226_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..226
DNA (225bp) protein (75aa)
carB; carbamoyl phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Phosphoribosylglycinamide synthetase, ATP-grasp domain protein n=3 Tax=Clostridium difficile RepID=T4DXP7_CLODI
MGS-like domain protein {ECO:0000313|EMBL:EFH05241.1}; Flags: Fragment;; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
64_010_scaffold_226_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

607..729
DNA (123bp) protein (41aa)
Uncharacterized protein n=168 Tax=Clostridium difficile RepID=G6BRB9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL31827.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_226_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

726..1412
DNA (687bp) protein (229aa)
Two-component response regulator n=178 Tax=Clostridium difficile RepID=C9XSJ2_CLODC
two-component response regulator
Two-component response regulator, CheY family {ECO:0000313|EMBL:CCL31826.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_226_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1369..2388
DNA (1020bp) protein (340aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Two-component sensor histidine kinase n=14 Tax=Clostridium difficile RepID=U4BUW1_CLODI
two-component sensor histidine kinase
64_010_scaffold_226_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2471..3157
DNA (687bp) protein (229aa)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CCL31824.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL31824.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
ABC transporter, ATP-binding protein n=194 Tax=Clostridium difficile RepID=C9XSJ0_CLODC
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
64_010_scaffold_226_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3157..5703
DNA (2547bp) protein (849aa)
ABC-type transport system, permease n=25 Tax=Clostridium difficile RepID=Q181I5_CLOD6
ABC transporter permease; K02004 putative ABC transport system permease protein
ABC transporter permease {ECO:0000313|EMBL:CKG68803.1}; ABC-type transport system, permease {ECO:0000313|EMBL:CEK00301.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_226_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5859..6716)
DNA (858bp) protein (286aa)
Transcriptional regulator, MerR family n=169 Tax=Clostridium difficile RepID=Q181I6_CLOD6
MerR family transcriptional regulator
MerR regulatory family protein {ECO:0000313|EMBL:EQG73247.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_226_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6737..7402)
DNA (666bp) protein (222aa)
pseudouridylate synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase, RluA family n=188 Tax=Clostridium difficile RepID=G6BRC5_CLODI
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:EQI74912.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
64_010_scaffold_226_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7402..8274)
DNA (873bp) protein (291aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Uncharacterized protein n=199 Tax=Clostridium difficile RepID=C9XSI6_CLODC
Conserved hypothetical 95 family protein {ECO:0000313|EMBL:EQG73224.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_226_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8442..9185
DNA (744bp) protein (248aa)
Uncharacterized protein n=92 Tax=Clostridium difficile RepID=Q181I4_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ33753.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_010_scaffold_226_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9404..9631)
DNA (228bp) protein (76aa)
Uncharacterized protein n=187 Tax=Clostridium difficile RepID=C9XSI4_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL00020.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
64_010_scaffold_226_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9834..10403
DNA (570bp) protein (190aa)
Resolvase n=194 Tax=Clostridium difficile RepID=Q181H9_CLOD6
resolvase
Resolvase {ECO:0000313|EMBL:CCL31817.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_226_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10963..12117
DNA (1155bp) protein (385aa)
mdeA; methionine gamma-lyase (EC:4.4.1.11); K01761 methionine-gamma-lyase [EC:4.4.1.11]
Methionine gamma-lyase {ECO:0000313|EMBL:CAJ70484.1}; EC=4.4.1.11 {ECO:0000313|EMBL:CAJ70484.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Methionine gamma-lyase n=28 Tax=Clostridium difficile RepID=T3FZ53_CLODC
64_010_scaffold_226_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12168..13421
DNA (1254bp) protein (418aa)
Major Facilitator Superfamily protein n=161 Tax=Clostridium difficile RepID=T3FZW4_CLODC
transporter
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EQE58758.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_226_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13547..14941
DNA (1395bp) protein (465aa)
Solute symporter family protein n=166 Tax=Clostridium difficile RepID=T3G1L2_CLODC
sodium:solute symporter; K03307 solute:Na+ symporter, SSS family
Solute symporter family protein {ECO:0000313|EMBL:EQE58752.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_226_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14956..15186
DNA (231bp) protein (77aa)
Uncharacterized protein n=91 Tax=Clostridium difficile RepID=Q181H7_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL24049.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_226_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15203..15733
DNA (531bp) protein (177aa)
Uncharacterized protein n=139 Tax=Clostridium difficile RepID=T3G2T9_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL24048.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_226_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15909..16619
DNA (711bp) protein (237aa)
Uncharacterized protein n=180 Tax=Clostridium difficile RepID=C9XSH7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ70479.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_226_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16734..17231
DNA (498bp) protein (166aa)
Uncharacterized protein n=191 Tax=Clostridium difficile RepID=Q181H5_CLOD6
hypothetical protein
SEC-C motif family protein {ECO:0000313|EMBL:EQG73205.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_226_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17241..17402
DNA (162bp) protein (54aa)
Uncharacterized protein n=213 Tax=Clostridium difficile RepID=C9XSH5_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE58762.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_226_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17512..18450
DNA (939bp) protein (313aa)
dipeptidase; K01273 membrane dipeptidase [EC:3.4.13.19]
Membrane dipeptidase family protein n=134 Tax=Clostridium difficile RepID=C9XSH4_CLODC
Membrane dipeptidase family protein {ECO:0000313|EMBL:EQG73233.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_226_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18534..19394
DNA (861bp) protein (287aa)
Sporulation-specific protease n=217 Tax=Clostridium difficile RepID=Q181G9_CLOD6
peptidase; K06436 spore coat assemly protein
Sporulation-specific protease {ECO:0000313|EMBL:CCK96060.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
64_010_scaffold_226_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19500..19808
DNA (309bp) protein (103aa)
Uncharacterized protein n=33 Tax=Clostridium difficile RepID=D5QA10_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFH05266.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
veg; hypothetical protein
64_010_scaffold_226_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19902..21452
DNA (1551bp) protein (517aa)
LysM domain protein n=73 Tax=Clostridium difficile RepID=T3G2W0_CLODC
cell wall hydrolase
Putative phage cell wall hydrolase {ECO:0000313|EMBL:CCL31805.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_226_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21570..22460
DNA (891bp) protein (297aa)
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=167 Tax=Clostridium difficile RepID=ISPE_CLOD6
64_010_scaffold_226_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22408..23124
DNA (717bp) protein (239aa)
FCD domain protein n=3 Tax=Clostridium difficile RepID=G6B3Q4_CLODI
FCD domain protein {ECO:0000313|EMBL:EHJ26621.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
GntR family transcriptional regulator
64_010_scaffold_226_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23268..23927
DNA (660bp) protein (220aa)
Stage II sporulation protein n=211 Tax=Clostridium difficile RepID=C9XSG8_CLODC
spoIIR; stage II sporulation protein; K06387 stage II sporulation protein R
Pro-sigma(E) endopeptidase (Stage II sporulation) {ECO:0000313|EMBL:CCL31802.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_226_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23957..24463
DNA (507bp) protein (169aa)
spore cortex-lytic enzyme; K01449 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
Cell Wall Hydrolase family protein n=1 Tax=Clostridium difficile F253 RepID=T4A9H8_CLODI
Putative spore cortex-lytic enzyme {ECO:0000313|EMBL:CDS90200.1}; Putative spore cortex-lytic hydrolase {ECO:0000313|EMBL:CEK00279.1}; Spore cortex-lytic enzyme {ECO:0000313|EMBL:CKG69492.1}; Spore-cortex-lytic protein {ECO:0000313|EMBL:CDS89982.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_226_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24665..25471
DNA (807bp) protein (269aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Glutamate racemase n=201 Tax=Clostridium difficile RepID=C9XSG6_CLODC
glutamate racemase
64_010_scaffold_226_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25488..25916
DNA (429bp) protein (143aa)
Uncharacterized protein n=25 Tax=Clostridium difficile RepID=C9XSG5_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE07453.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Displaying items 1-30 of 40 in total

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