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64_010_scaffold_241

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_241_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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86..823
DNA (738bp) protein (246aa)
CRISPR-associated endoribonuclease Cas6 n=74 Tax=Clostridium difficile RepID=T3GIH6_CLODC
hypothetical protein
CRISPR-associated endoribonuclease Cas6 {ECO:0000313|EMBL:CKH32957.1}; Putative CRISPR-associated protein {ECO:0000313|EMBL:CEJ99076.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_241_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

828..2303
DNA (1476bp) protein (492aa)
Uncharacterized protein n=26 Tax=Clostridium difficile RepID=T3GE73_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69341.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_241_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2323..3339
DNA (1017bp) protein (339aa)
CRISPR-associated autoregulator DevR family protein n=74 Tax=Clostridium difficile RepID=T3GF48_CLODC
hypothetical protein
Putative CRISPR-associated negative autoregulator {ECO:0000313|EMBL:CCL22789.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_241_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3355..4152
DNA (798bp) protein (266aa)
CRISPR-associated Cas5 domain protein n=74 Tax=Clostridium difficile RepID=T3GGS3_CLODC
hypothetical protein
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:CKH32900.1}; Putative CRISPR-associated protein {ECO:0000313|EMBL:CEJ99073.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_241_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4179..6587
DNA (2409bp) protein (803aa)
CRISPR-associated endonuclease Cas3-HD n=74 Tax=Clostridium difficile RepID=T2TX98_CLODI
ATP-dependent helicase
Putative CRISPR-associated ATP-dependent helicase {ECO:0000313|EMBL:CAJ69338.2}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_241_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7028..7975
DNA (948bp) protein (316aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
prmA; ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase n=133 Tax=Clostridium difficile RepID=T3GE83_CLODC
64_010_scaffold_241_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7994..8752
DNA (759bp) protein (253aa)
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Ribosomal RNA small subunit methyltransferase E n=178 Tax=Clostridium difficile RepID=C9XLN3_CLODC
64_010_scaffold_241_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8754..10052
DNA (1299bp) protein (433aa)
Putative MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CEJ99069.1}; Radical SAM protein {ECO:0000313|EMBL:CKH32786.1}; EC=2.-.-.- {ECO:0000313|EMBL:CKH32786.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
tRNA methylthiotransferase YqeV n=161 Tax=Clostridium difficile RepID=G6BZJ4_CLODI
radical SAM protein
64_010_scaffold_241_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10095..10445
DNA (351bp) protein (117aa)
HIT domain protein n=208 Tax=Clostridium difficile RepID=C9XLN1_CLODC
histidine triad nucleotide-binding protein; K02503 Hit-like protein involved in cell-cycle regulation
HIT domain protein {ECO:0000313|EMBL:EQE60943.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_241_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10608..10787
DNA (180bp) protein (60aa)
30S ribosomal protein S21 n=221 Tax=Clostridium difficile RepID=RS21_CLOD6
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_010_scaffold_241_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10817..11260
DNA (444bp) protein (148aa)
YqeY-like protein n=222 Tax=Clostridium difficile RepID=D5Q2K1_CLODI
tRNA binding protein
Putative aspartyl/glutamyl-tRNA amidotransferase subunit B-related {ECO:0000313|EMBL:CCA62875.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_241_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11371..11868
DNA (498bp) protein (166aa)
Probale sensory protein n=194 Tax=Clostridium difficile RepID=C9XLM8_CLODC
sensory protein; K07185 tryptophan-rich sensory protein
Putative transmembrane signaling protein,TspO/MBR family {ECO:0000313|EMBL:CCL22780.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_241_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12061..12624
DNA (564bp) protein (188aa)
Ribosomal subunit interface protein n=205 Tax=Clostridium difficile RepID=G6BCV3_CLODI
sigma 54 modulation protein; K05808 putative sigma-54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EHJ25265.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_010_scaffold_241_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12831..13073
DNA (243bp) protein (81aa)
Uncharacterized protein n=223 Tax=Clostridium difficile RepID=C9XLM6_CLODC
hypothetical protein
Putative sporulation protein YqfC {ECO:0000313|EMBL:EFH07727.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
64_010_scaffold_241_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13086..14429
DNA (1344bp) protein (448aa)
Sporulation protein YqfD n=65 Tax=Clostridium difficile RepID=T3GIL0_CLODC
spoIV; stage IV sporulation protein; K06438 similar to stage IV sporulation protein
Stage IV sporulation protein {ECO:0000313|EMBL:CCL22777.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_241_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14368..15483
DNA (1116bp) protein (372aa)
PhoH-like protein n=28 Tax=Clostridium difficile RepID=U3WMD8_CLODI
PhoH-like protein {ECO:0000313|EMBL:EHJ27833.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
PhoH-like protein
64_010_scaffold_241_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15540..16001
DNA (462bp) protein (154aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Endoribonuclease YbeY n=209 Tax=Clostridium difficile RepID=YBEY_CLOD6
hypothetical protein; K07042 probable rRNA maturation factor
64_010_scaffold_241_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16007..16726
DNA (720bp) protein (240aa)
membrane-associated kinase and phosphatase; K00901 diacylglycerol kinase [EC:2.7.1.107]
Putative diacylglycerol kinase {ECO:0000313|EMBL:CCK87778.1}; EC=2.7.1.- {ECO:0000313|EMBL:CCK87778.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
PAP2 superfamily protein n=208 Tax=Clostridium difficile RepID=C9XLM2_CLODC
64_010_scaffold_241_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16845..17246
DNA (402bp) protein (134aa)
d; cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase {ECO:0000313|EMBL:EQE61002.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EQE61002.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Cytidine deaminase n=168 Tax=Clostridium difficile RepID=C9XLM1_CLODC
64_010_scaffold_241_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17310..18203
DNA (894bp) protein (298aa)
GTPase Era n=187 Tax=Clostridium difficile RepID=ERA_CLOD6
era; GTP-binding protein; K03595 GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_010_scaffold_241_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18215..19594
DNA (1380bp) protein (460aa)
Magnesium transporter n=212 Tax=Clostridium difficile RepID=C9XLL9_CLODC
Mg2+ transporter; K06213 magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_010_scaffold_241_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19667..19822
DNA (156bp) protein (52aa)
YqzL-like family protein n=221 Tax=Clostridium difficile RepID=T3GF77_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30671.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_241_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19788..20561
DNA (774bp) protein (258aa)
DNA repair protein RecO n=25 Tax=Clostridium difficile RepID=RECO_CLOD6
recO; DNA repair protein; K03584 DNA repair protein RecO (recombination protein O)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_241_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20551..21153
DNA (603bp) protein (201aa)
Uncharacterized protein n=203 Tax=Clostridium difficile RepID=Q182C1_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK87772.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
64_010_scaffold_241_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21313..22191
DNA (879bp) protein (293aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Glycine--tRNA ligase alpha subunit n=219 Tax=Clostridium difficile RepID=SYGA_CLOD6
64_010_scaffold_241_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22191..24257
DNA (2067bp) protein (689aa)
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};; Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Glycine--tRNA ligase beta subunit n=29 Tax=Clostridium difficile RepID=SYGB_CLOD6
64_010_scaffold_241_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24423..25970)
DNA (1548bp) protein (516aa)
nitrite/sulfite reductase; K00366 ferredoxin-nitrite reductase [EC:1.7.7.1]
Putative nitrite/sulphite reductase {ECO:0000313|EMBL:CAJ69317.1}; EC=1.8.1.2 {ECO:0000313|EMBL:CAJ69317.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Nitrite/Sulfite reductase ferredoxin-like half domain protein n=137 Tax=Clostridium difficile RepID=C9XLL4_CLODC
64_010_scaffold_241_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26250..27017
DNA (768bp) protein (256aa)
Bacterial transcriptional regulator family protein n=218 Tax=Clostridium difficile RepID=C9XLL3_CLODC
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CCL30665.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_241_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27300..27497
DNA (198bp) protein (66aa)
4Fe-4S binding domain protein n=216 Tax=Clostridium difficile RepID=D5Q2L9_CLODI
oxidoreductase ferredoxin subunit
4Fe-4S binding domain protein {ECO:0000313|EMBL:EQG75803.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_241_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27526..28602
DNA (1077bp) protein (359aa)
Putative flavodoxin/ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CCL22762.1}; EC=1.2.7.- {ECO:0000313|EMBL:CCL22762.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein n=213 Tax=Clostridium difficile RepID=D5Q2M0_CLODI
oxidoreductase subunit
Displaying items 1-30 of 36 in total

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