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64_010_scaffold_253

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_253_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..513)
DNA (513bp) protein (171aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CKH35778.1}; EC=3.6.3.- {ECO:0000313|EMBL:CKH35778.1};; ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CDT65700.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDT65700.1};; Uncharacterized protein {ECO:0000313|EMBL:CDS88421.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
ABC-type transport system, ATP-binding protein n=106 Tax=Clostridium difficile RepID=Q182M1_CLOD6
ABC transporter ATP-binding protein
64_010_scaffold_253_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(630..1940)
DNA (1311bp) protein (437aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
His Kinase A domain protein n=9 Tax=Clostridium difficile RepID=T3GG53_CLODC
two-component sensor histidine kinase
64_010_scaffold_253_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1934..2641)
DNA (708bp) protein (236aa)
Two-component response regulator n=193 Tax=Clostridium difficile RepID=C9XMQ6_CLODC
two-component response regulator
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQH98499.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_010_scaffold_253_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2946..4787)
DNA (1842bp) protein (614aa)
Putative membrane-associated 5'-nucleotidase/phosphoesterase {ECO:0000313|EMBL:CAJ69424.1}; EC=3.1.3.5 {ECO:0000313|EMBL:CAJ69424.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Calcineurin-like phosphoesterase family protein n=3 Tax=Clostridium difficile RepID=T2TWH8_CLODI
membrane-associated 5'-nucleotidase/phosphoesterase
64_010_scaffold_253_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5000..5884)
DNA (885bp) protein (295aa)
Uncharacterized protein n=29 Tax=Clostridium difficile RepID=T3GEG6_CLODC
Uncharacterized protein {ECO:0000313|EMBL:EQH98501.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
lipoprotein
64_010_scaffold_253_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6092..7009
DNA (918bp) protein (306aa)
elaC; ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11]
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Ribonuclease Z n=196 Tax=Clostridium difficile RepID=RNZ_CLOD6
64_010_scaffold_253_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7151..8485)
DNA (1335bp) protein (445aa)
nox; coenzyme A disulfide reductase (EC:1.6.99.3); K00359 NADH oxidase [EC:1.6.-.-]
Pyridine nucleotide-disulfide oxidoreductase family protein n=109 Tax=Clostridium difficile RepID=T3GHY3_CLODC
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:EQE60806.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_253_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8826..10214
DNA (1389bp) protein (463aa)
Dicarboxylate family transmembrane symporter n=20 Tax=Clostridium difficile RepID=T2TX66_CLODI
Dicarboxylate family transmembrane symporter {ECO:0000313|EMBL:EQE60790.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
sodium:dicarboxylate symporter family protein; K06956
64_010_scaffold_253_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10288..11496)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=132 Tax=Clostridium difficile RepID=T3GEF3_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69429.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_253_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11511..12929)
DNA (1419bp) protein (473aa)
polysaccharide O-acetylase (EC:2.3.1.-); K00680 [EC:2.3.1.-]
Putative membrane-bound 0-ACYL transferase,MBOAT family {ECO:0000313|EMBL:CAJ69430.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAJ69430.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
MBOAT, membrane-bound O-acyltransferase family protein n=87 Tax=Clostridium difficile RepID=T4ALQ2_CLODI
64_010_scaffold_253_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12947..14023)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=25 Tax=Clostridium difficile RepID=U4AX36_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQI80542.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
hypothetical protein
64_010_scaffold_253_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14034..16340)
DNA (2307bp) protein (769aa)
cellulose synthase catalytic subunit (EC:2.4.1.12); K00694 cellulose synthase (UDP-forming) [EC:2.4.1.12]
Glycosyl transferase 2 family protein n=6 Tax=Clostridium difficile RepID=T3GIG1_CLODC
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EQI80543.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
64_010_scaffold_253_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16345..17325)
DNA (981bp) protein (327aa)
endoglucanase (EC:3.2.1.4); K01179 endoglucanase [EC:3.2.1.4]
Endoglucanase n=82 Tax=Clostridium difficile RepID=T3GG35_CLODC
Endoglucanase {ECO:0000313|EMBL:EQE60815.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_253_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17628..19376)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=27 Tax=Clostridium difficile RepID=T3GEF8_CLODC
Uncharacterized protein {ECO:0000313|EMBL:EQG75270.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hypothetical protein
64_010_scaffold_253_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19434..20243)
DNA (810bp) protein (270aa)
Binding--dependent transport system inner membrane component family protein n=162 Tax=Clostridium difficile RepID=C9XMR7_CLODC
sugar transporter permease; K10190 lactose/L-arabinose transport system permease protein
ABC-type transport system, sugar-family permease {ECO:0000313|EMBL:CAJ69435.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_253_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20259..21176)
DNA (918bp) protein (306aa)
Binding--dependent transport system inner membrane component family protein n=140 Tax=Clostridium difficile RepID=T3GHX3_CLODC
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQE60803.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
sugar transporter permease; K02025 multiple sugar transport system permease protein
64_010_scaffold_253_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21274..22584)
DNA (1311bp) protein (437aa)
ABC transporter, solute-binding protein n=6 Tax=Clostridium difficile RepID=G6C079_CLODI
sugar transporter, substrate-binding lipoprotein
Putative sugar transporter, substrate-binding lipoprotein {ECO:0000313|EMBL:CBE05760.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_010_scaffold_253_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22784..22894)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Clostridium difficile (strain 630) RepID=Q182N9_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69438.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_253_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22907..23647)
DNA (741bp) protein (247aa)
SIS domain protein n=44 Tax=Clostridium difficile RepID=T3GG38_CLODC
hypothetical protein
Putative phosphosugar isomerase {ECO:0000313|EMBL:CCL22904.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_253_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23650..24909)
DNA (1260bp) protein (420aa)
PTS system sugar-specific permease component family protein n=59 Tax=Clostridium difficile RepID=T2WE86_CLODI
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:EQE60819.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
ulaA; PTS system ascorbate-specific transporter subunit IIC
64_010_scaffold_253_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25042..25329)
DNA (288bp) protein (96aa)
phosphotransferase system, B component; K02822 PTS system, ascorbate-specific IIB component [EC:2.7.1.69]
PTS system, fructose/mannitol-family IIB component {ECO:0000313|EMBL:CCL30791.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCL30791.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
PTS system, Lactose/Cellobiose specific IIB subunit n=195 Tax=Clostridium difficile RepID=C9XMS2_CLODC
64_010_scaffold_253_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25342..27261)
DNA (1920bp) protein (640aa)
PRD domain protein n=50 Tax=Clostridium difficile RepID=T3GHX8_CLODC
PTS system, fructose/mannitol-family IIAB component {ECO:0000313|EMBL:CAJ69444.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
hypothetical protein
64_010_scaffold_253_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27605..28129)
DNA (525bp) protein (175aa)
Uncharacterized protein n=206 Tax=Clostridium difficile RepID=C9XMS4_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE60823.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_253_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28133..28630)
DNA (498bp) protein (166aa)
coaD; phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Phosphopantetheine adenylyltransferase n=219 Tax=Clostridium difficile RepID=C9XMS5_CLODC
64_010_scaffold_253_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28632..29186)
DNA (555bp) protein (185aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EQE60820.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQE60820.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
RNA methyltransferase, RsmD family n=203 Tax=Clostridium difficile RepID=T3GHV2_CLODC
hypothetical protein
64_010_scaffold_253_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29245..31314)
DNA (2070bp) protein (690aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=15 Tax=Clostridium difficile RepID=U3WCK3_CLODI
ATP-dependent DNA helicase {ECO:0000313|EMBL:CBE05774.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_010_scaffold_253_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31383..33026)
DNA (1644bp) protein (548aa)
Phosphatase {ECO:0000313|EMBL:CKH36788.1}; Putative dihydroxyacetone/glyceraldehyde kinase {ECO:0000313|EMBL:CDS88464.1}; EC=2.7.-.- {ECO:0000313|EMBL:CDS88464.1};; Putative phosphatase {ECO:0000313|EMBL:CDS85180.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
DAK2 domain fusion YloV family protein n=152 Tax=Clostridium difficile RepID=C9XMS8_CLODC
phosphatase; K07030
64_010_scaffold_253_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33045..33395)
DNA (351bp) protein (117aa)
Asp23 family protein n=211 Tax=Clostridium difficile RepID=C9XMS9_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30798.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Displaying 28 items

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