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64_010_scaffold_266

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_266_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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356..1024
DNA (669bp) protein (223aa)
Transporter gate domain protein n=175 Tax=Clostridium difficile RepID=G6C024_CLODI
hypothetical protein
Nucleoside recognition family protein {ECO:0000313|EMBL:EQG76317.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_266_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1026..1511
DNA (486bp) protein (162aa)
Transporter gate domain protein n=198 Tax=Clostridium difficile RepID=G6C023_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCL30966.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_266_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1572..2693
DNA (1122bp) protein (374aa)
amidohydrolase; K14665 amidohydrolase [EC:3.5.1.-]
Amidohydrolase family protein n=19 Tax=Clostridium difficile RepID=T2TW84_CLODI
Amidohydrolase family protein {ECO:0000313|EMBL:EQE60465.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_266_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2974..4164
DNA (1191bp) protein (397aa)
aminotransferase; K14155 cystathione beta-lyase [EC:4.4.1.8]
C-S lyase family protein {ECO:0000313|EMBL:EQE60469.1}; EC=4.4.-.- {ECO:0000313|EMBL:EQE60469.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
C-S lyase family protein n=131 Tax=Clostridium difficile RepID=T3GFB3_CLODC
64_010_scaffold_266_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4612..5613
DNA (1002bp) protein (334aa)
asnA; asparagine synthetase AsnA; K01914 aspartate--ammonia ligase [EC:6.3.1.1]
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Aspartate--ammonia ligase n=206 Tax=Clostridium difficile RepID=C9XN65_CLODC
64_010_scaffold_266_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5717..6106
DNA (390bp) protein (130aa)
Uncharacterized protein n=156 Tax=Clostridium difficile RepID=G6C019_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL23054.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
64_010_scaffold_266_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6267..7475
DNA (1209bp) protein (403aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=199 Tax=Clostridium difficile RepID=G6B545_CLODI
sodium:dicarboxylate symporter
Dicarboxylate symporter family protein {ECO:0000313|EMBL:EQE60470.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_266_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7561..8637)
DNA (1077bp) protein (359aa)
Aminotransferase class I and II family protein n=7 Tax=Clostridium difficile RepID=T2TW78_CLODI
aminotransferase
Putative histidinol-phosphate transaminase {ECO:0000313|EMBL:EHJ32843.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_010_scaffold_266_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8866..9393
DNA (528bp) protein (176aa)
hpt; phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CCK95210.1}; EC=2.4.2.8 {ECO:0000313|EMBL:CCK95210.1};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
Hypoxanthine phosphoribosyltransferase n=216 Tax=Clostridium difficile RepID=Q183C4_CLOD6
64_010_scaffold_266_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9482..10414
DNA (933bp) protein (311aa)
PAP2 superfamily protein n=29 Tax=Clostridium difficile RepID=T3GBW8_CLODC
Putative membrane-associated phosphatase {ECO:0000313|EMBL:CCL23050.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
membrane-associated phosphatase
64_010_scaffold_266_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10476..11702
DNA (1227bp) protein (409aa)
Flavo, HI0933 family protein n=50 Tax=Clostridium difficile RepID=T3GDH4_CLODC
lipoprotein; K07007
Putative lipoprotein {ECO:0000313|EMBL:CAJ69575.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_266_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11786..12007
DNA (222bp) protein (74aa)
Small acid-soluble spore protein A n=215 Tax=Clostridium difficile RepID=C9XN58_CLODC
sspA; small acid-soluble spore protein A
Small, acid-soluble spore protein alpha {ECO:0000313|EMBL:EQF23814.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
64_010_scaffold_266_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12196..12366
DNA (171bp) protein (57aa)
Uncharacterized protein n=214 Tax=Clostridium difficile RepID=F3Y5V5_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK95206.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
64_010_scaffold_266_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12459..12920)
DNA (462bp) protein (154aa)
Uncharacterized protein n=144 Tax=Clostridium difficile RepID=Q183B9_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69573.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_266_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13109..13570
DNA (462bp) protein (154aa)
Uncharacterized protein n=188 Tax=Clostridium difficile RepID=T3GAT0_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE60569.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_266_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13613..15376
DNA (1764bp) protein (588aa)
Stage II sporulation E family protein n=97 Tax=Clostridium difficile RepID=T3GBX3_CLODC
regulatory protein
Stage II sporulation E family protein {ECO:0000313|EMBL:EQI79736.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
64_010_scaffold_266_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15384..15992
DNA (609bp) protein (203aa)
Flavin reductase n=165 Tax=Clostridium difficile RepID=G6C008_CLODI
iron-sulfur flavoprotein
Putative flavodoxin-related protein {ECO:0000313|EMBL:CCL23043.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_266_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16064..16633
DNA (570bp) protein (190aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
Phosphate propanoyltransferase n=207 Tax=Clostridium difficile RepID=C9XN53_CLODC
propanediol utilization protein
64_010_scaffold_266_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17151..20690
DNA (3540bp) protein (1180aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
nifJ; pyruvate-flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-]
Pyruvate-flavodoxin oxidoreductase n=129 Tax=Clostridium difficile RepID=T2TE27_CLODI
64_010_scaffold_266_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21082..22008)
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=T4PHK5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG76755.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Calcium-chelating exported protein
64_010_scaffold_266_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22503..23837)
DNA (1335bp) protein (445aa)
Citrate transporter n=168 Tax=Clostridium difficile RepID=G6C004_CLODI
permease
Putative permease {ECO:0000313|EMBL:CCL23036.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_266_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23899..24675)
DNA (777bp) protein (259aa)
bdhA; 3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:CDT03801.1}; EC=1.1.1.30 {ECO:0000313|EMBL:CDT03801.1};; Putative dehydrogenase {ECO:0000313|EMBL:CDS88685.1}; EC=1.1.1.- {ECO:0000313|EMBL:CDS88685.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
3-hydroxybutyrate dehydrogenase family protein n=4 Tax=Clostridium difficile RepID=T2TYS8_CLODI
64_010_scaffold_266_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24780..25445)
DNA (666bp) protein (222aa)
ctfB; butyrate--acetoacetate CoA-transferase subunit B (EC:2.8.3.9); K01035 acetate CoA-transferase beta subunit [EC:2.8.3.8]
Butyrate--acetoacetate CoA-transferase subunit B {ECO:0000313|EMBL:EQG75054.1}; EC=2.8.3.9 {ECO:0000313|EMBL:EQG75054.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Succinyl CoA:3-oxoacid CoA-transferase subunit B n=182 Tax=Clostridium difficile RepID=Q183B1_CLOD6
64_010_scaffold_266_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25445..26101)
DNA (657bp) protein (219aa)
ctfA; butyrate--acetoacetate CoA-transferase subunit A; K01034 acetate CoA-transferase alpha subunit [EC:2.8.3.8]
Succinyl CoA:3-oxoacid CoA-transferase subunit A {ECO:0000313|EMBL:CCL30914.1}; EC=2.8.3.- {ECO:0000313|EMBL:CCL30914.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Butyrate--acetoacetate CoA-transferase subunit A n=127 Tax=Clostridium difficile RepID=C9XN47_CLODC
64_010_scaffold_266_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26110..27288)
DNA (1179bp) protein (393aa)
Acetoacetyl-CoA thiolase 2 {ECO:0000313|EMBL:CDT03846.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CDT03846.1};; Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CDS88678.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CDS88678.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
thlA2; acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=4 Tax=Clostridium difficile RepID=T2TWE1_CLODI
64_010_scaffold_266_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27643..28545
DNA (903bp) protein (301aa)
LysR-family transcriptional regulator n=184 Tax=Clostridium difficile RepID=C9XN45_CLODC
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCL30912.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
64_010_scaffold_266_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28761..29573)
DNA (813bp) protein (271aa)
Binding--dependent transport system inner membrane component family protein n=61 Tax=Clostridium difficile RepID=T3GFN6_CLODC
ABC-type transport system, oligopeptide-family permease protein {ECO:0000313|EMBL:CCL23030.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
appC; oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
64_010_scaffold_266_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29576..30535)
DNA (960bp) protein (320aa)
Binding--dependent transport system inner membrane component family protein n=124 Tax=Clostridium difficile RepID=C9XN43_CLODC
appB; oligopeptide ABC transporter permease; K02033 peptide/nickel transport system permease protein
Oligopeptide ABC transporter, permease protein {ECO:0000313|EMBL:CBE05979.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_010_scaffold_266_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30641..32200)
DNA (1560bp) protein (520aa)
Bacterial extracellular solute-binding s, 5 Middle family protein n=113 Tax=Clostridium difficile RepID=T3GC75_CLODC
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:EQI79763.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
appA; oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Displaying 29 items

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