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64_010_scaffold_299

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_299_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(142..672)
DNA (531bp) protein (177aa)
Flavodoxin n=2 Tax=Clostridium difficile RepID=G6BV77_CLODI
floX; flavodoxin; K03809 Trp repressor binding protein
Flavodoxin {ECO:0000313|EMBL:EHJ31165.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_010_scaffold_299_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(766..1776)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=182 Tax=Clostridium difficile RepID=T3I9X2_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE68623.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_299_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2264..2608
DNA (345bp) protein (115aa)
Uncharacterized protein n=208 Tax=Clostridium difficile RepID=C9XM38_CLODC
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CEJ97354.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84695.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_299_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2940..4316)
DNA (1377bp) protein (459aa)
Sensory box protein n=158 Tax=Clostridium difficile RepID=T3I710_CLODC
sigma-54-dependent transcriptional regulator
Sensory box protein {ECO:0000313|EMBL:EQE68650.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_299_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4415..5434)
DNA (1020bp) protein (340aa)
Electron transfer flavoFAD-binding domain protein n=183 Tax=Clostridium difficile RepID=T3IA84_CLODC
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit
Electron transfer flavoprotein alpha-subunit {ECO:0000313|EMBL:CAJ67639.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_299_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5448..6242)
DNA (795bp) protein (265aa)
Electron transfer flavodomain protein n=198 Tax=Clostridium difficile RepID=T3I948_CLODC
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit
Electron transfer flavoprotein beta-subunit, core {ECO:0000313|EMBL:CDS84246.1}; Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:CDS84689.1}; Electron transfer flavoproteinbeta-subunit,core {ECO:0000313|EMBL:CEJ97351.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_299_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6253..7395)
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase, N-terminal domain protein n=186 Tax=Clostridium difficile RepID=T3I458_CLODC
Acyl-CoA dehydrogenase, N-terminal domain protein {ECO:0000313|EMBL:EQE68599.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_299_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7435..8667)
DNA (1233bp) protein (411aa)
CoA-transferase III family protein n=84 Tax=Clostridium difficile RepID=C9XM33_CLODC
CoA-transferase
Putative 3-methyl-2-oxobutanoate dehydrogenase {ECO:0000313|EMBL:EHJ31172.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_010_scaffold_299_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8804..10144)
DNA (1341bp) protein (447aa)
Citrate transporter family protein n=190 Tax=Clostridium difficile RepID=C9XM32_CLODC
permease
Citrate transporter family protein {ECO:0000313|EMBL:EQG78381.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
64_010_scaffold_299_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10239..11054)
DNA (816bp) protein (272aa)
crt1; 3-hydroxybutyryl-CoA dehydratase; K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
3-hydroxybutyryl-CoA dehydratase (Crotonase) n=96 Tax=Clostridium difficile RepID=C9XM31_CLODC
3-hydroxybutyryl-CoA dehydratase (Crotonase) {ECO:0000313|EMBL:CBE02737.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_010_scaffold_299_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11662..12855)
DNA (1194bp) protein (398aa)
CoA-transferase III family protein n=141 Tax=Clostridium difficile RepID=T3I943_CLODC
act; beta-alanine CoA-transferase
CoA-transferase III family protein {ECO:0000313|EMBL:EQE68629.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_299_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12931..14286)
DNA (1356bp) protein (452aa)
Citrate transporter family protein n=4 Tax=Clostridium difficile RepID=T4AZC8_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE02734.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
64_010_scaffold_299_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14331..15227)
DNA (897bp) protein (299aa)
hydroxymethylglutaryl-CoA lyase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
Putative hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:CKH58324.1}; EC=4.1.3.4 {ECO:0000313|EMBL:CKH58324.1};; Putative pyruvate carboxyltransferase {ECO:0000313|EMBL:CEJ97344.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Hydroxymethylglutaryl-CoA lyase yngG n=87 Tax=Clostridium difficile RepID=T3I585_CLODC
64_010_scaffold_299_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15493..16497
DNA (1005bp) protein (335aa)
LacI-family transcriptional regulator n=183 Tax=Clostridium difficile RepID=C9XM27_CLODC
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:CKH58356.1}; Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDS84231.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_299_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16664..17383)
DNA (720bp) protein (240aa)
Probable transcriptional regulatory protein CD630_07950 n=207 Tax=Clostridium difficile RepID=Y795_CLOD6
hypothetical protein
Probable transcriptional regulatory protein BN172_1300013 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_299_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17466..18221)
DNA (756bp) protein (252aa)
nadE; NH3-dependent NAD(+) synthetase (EC:6.3.1.5); K01916 NAD+ synthase [EC:6.3.1.5]
NH3-dependent NAD(+) synthetase {ECO:0000313|EMBL:CAJ67628.1}; EC=6.3.1.5 {ECO:0000313|EMBL:CAJ67628.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
NH(3)-dependent NAD(+) synthetase n=201 Tax=Clostridium difficile RepID=T3I927_CLODC
64_010_scaffold_299_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18400..18786
DNA (387bp) protein (129aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=G6B738_CLODI
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:EHJ31177.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
64_010_scaffold_299_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18786..19163
DNA (378bp) protein (126aa)
Uncharacterized protein n=189 Tax=Clostridium difficile RepID=G6BV60_CLODI
hypothetical protein; K07090
Putative membrane protein, DUF81 family {ECO:0000313|EMBL:CDT44302.1}; Putative permease {ECO:0000313|EMBL:CKH58488.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84675.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_299_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19249..19917)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T3EGU2_CLODI
YigZ family protein {ECO:0000313|EMBL:EHJ31449.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
64_010_scaffold_299_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20198..20641)
DNA (444bp) protein (148aa)
NUDIX domain protein n=207 Tax=Clostridium difficile RepID=T3I485_CLODC
NUDIX family hydrolase
NUDIX domain protein {ECO:0000313|EMBL:EQF26564.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
64_010_scaffold_299_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20727..21404)
DNA (678bp) protein (226aa)
HEAT repeats family protein n=160 Tax=Clostridium difficile RepID=T3I5B8_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL20906.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_299_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21412..22695)
DNA (1284bp) protein (428aa)
GTPase HflX n=129 Tax=Clostridium difficile RepID=T3I730_CLODC
ATP/GTP-binding protein; K03665 GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_299_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22912..23172
DNA (261bp) protein (87aa)
Cysteine-rich small domain protein n=137 Tax=Clostridium difficile RepID=T3IAA9_CLODC
metal-binding protein
Cysteine-rich small domain protein {ECO:0000313|EMBL:EQI88889.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
64_010_scaffold_299_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23314..23961)
DNA (648bp) protein (216aa)
Uncharacterized protein n=120 Tax=Clostridium difficile RepID=T3I970_CLODC
hypothetical protein
Membrane spanning protein {ECO:0000313|EMBL:CKH58759.1}; Putative membrane protein {ECO:0000313|EMBL:CEJ97333.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_299_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23990..25570)
DNA (1581bp) protein (527aa)
ABC transporter, ATP-binding protein n=8 Tax=Clostridium difficile RepID=D5Q117_CLODI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFH16685.1}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
ABC transporter ATP-binding protein
64_010_scaffold_299_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25742..26626)
DNA (885bp) protein (295aa)
N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CAJ67618.1}; EC=3.5.1.- {ECO:0000313|EMBL:CAJ67618.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
N-acetylmuramoyl-L-alanine amidase family protein n=26 Tax=Clostridium difficile RepID=T3I5B4_CLODC
64_010_scaffold_299_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26854..27861
DNA (1008bp) protein (336aa)
Stage IV sporulation protein SpoIVB, S55 peptidase family n=178 Tax=Clostridium difficile RepID=Q189X8_CLOD6
stage IV sporulation protein
SpoIVB peptidase S55 family protein {ECO:0000313|EMBL:EQE68653.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Displaying 27 items

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