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64_010_scaffold_327

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_327_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(486..668)
DNA (183bp) protein (61aa)
Penicillinase repressor family protein n=79 Tax=Clostridium difficile RepID=T3I2V4_CLODC
Regulatory protein {ECO:0000313|EMBL:CKH18359.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
regulatory protein
64_010_scaffold_327_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1046..1222
DNA (177bp) protein (59aa)
Uncharacterized protein n=107 Tax=Clostridium difficile RepID=T3IS53_CLODC
Uncharacterized protein {ECO:0000313|EMBL:CCA62840.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
hypothetical protein
64_010_scaffold_327_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1448..1648
DNA (201bp) protein (67aa)
Cold shock protein n=176 Tax=Clostridium difficile RepID=C9XJM3_CLODC
cspC; cold shock protein
Cold shock protein CspD {ECO:0000313|EMBL:EQE63856.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_327_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1812..2156)
DNA (345bp) protein (115aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=U3YQR9_CLODI
Predicted ATP-binding protein involved in virulence {ECO:0000313|EMBL:CKH18435.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
64_010_scaffold_327_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2399..2581
DNA (183bp) protein (61aa)
Integrase n=73 Tax=Clostridium difficile RepID=U3ZG33_CLODI
integrase
Phage integrase family protein {ECO:0000313|EMBL:EQE63851.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
64_010_scaffold_327_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2652..3497
DNA (846bp) protein (282aa)
NTF2-like N-terminal transpeptidase domain protein n=132 Tax=Clostridium difficile RepID=T2TLW0_CLODI
lipoprotein
Lipoprotein {ECO:0000313|EMBL:CKH18453.1}; Putative lipoprotein {ECO:0000313|EMBL:CEJ98572.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_327_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3721..3885)
DNA (165bp) protein (55aa)
Uncharacterized protein n=217 Tax=Clostridium difficile RepID=C9XJM5_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK98334.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
64_010_scaffold_327_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4426..4758)
DNA (333bp) protein (111aa)
Uncharacterized protein n=96 Tax=Clostridium difficile RepID=T3GP85_CLODC
decarboxylase
Putative decarboxylase {ECO:0000313|EMBL:CCL22232.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_327_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5002..5643)
DNA (642bp) protein (214aa)
Uncharacterized protein n=128 Tax=Clostridium difficile RepID=G6BRS0_CLODI
hypothetical protein
Putative membrane protein, DUF1648 family {ECO:0000313|EMBL:CAJ68872.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_327_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5624..5923)
DNA (300bp) protein (100aa)
ArsR-family transcriptional regulator n=14 Tax=Clostridium difficile RepID=C9XJM8_CLODC
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EHJ27538.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
64_010_scaffold_327_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6540..6674)
DNA (135bp) protein (45aa)
Uncharacterized protein n=220 Tax=Clostridium difficile RepID=T3GMH0_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQH99637.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_010_scaffold_327_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6885..7637)
DNA (753bp) protein (251aa)
Sulfite exporter TauE/SafE family protein n=82 Tax=Clostridium difficile RepID=T3GJT8_CLODC
hypothetical protein; K07090
Putative membrane protein {ECO:0000313|EMBL:CCL22236.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
64_010_scaffold_327_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7696..9351)
DNA (1656bp) protein (552aa)
Transcriptional regulator, AraC family n=53 Tax=Clostridium difficile RepID=Q187V9_CLOD6
AraC family transcription regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CAJ68875.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_327_14
unknown

Not on your lists

comp(9497..9622)
DNA (126bp) protein (42aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6BRR5_CLODI
64_010_scaffold_327_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10624..11703)
DNA (1080bp) protein (360aa)
Putative alpha/beta hydrolase {ECO:0000313|EMBL:CKH18628.1}; EC=3.4.11.5 {ECO:0000313|EMBL:CKH18628.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Prolyl oligopeptidase family protein n=41 Tax=Clostridium difficile RepID=T2TYK8_CLODI
proline iminopeptidase
64_010_scaffold_327_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11787..12443)
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family n=3 Tax=Clostridium difficile RepID=Q187W0_CLOD6
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CAJ68877.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_327_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12765..12971
DNA (207bp) protein (69aa)
4-hydroxy-2-oxovalerate aldolase domain protein {ECO:0000313|EMBL:EQI83519.1}; EC=4.1.2.- {ECO:0000313|EMBL:EQI83519.1};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Uncharacterized protein n=72 Tax=Clostridium difficile RepID=G6BRR2_CLODI
hypothetical protein
64_010_scaffold_327_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13124..13552)
DNA (429bp) protein (143aa)
Flavodoxin n=33 Tax=Clostridium difficile RepID=Q187W1_CLOD6
fldX; flavodoxin
Flavodoxin {ECO:0000313|EMBL:CAJ68878.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
64_010_scaffold_327_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14028..14969)
DNA (942bp) protein (314aa)
ispD; major intracellular serine protease; K13275 major intracellular serine protease [EC:3.4.21.-]
Major intracellular serine protease {ECO:0000313|EMBL:EQI83521.1}; EC=3.4.21.- {ECO:0000313|EMBL:EQI83521.1};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Major intracellular serine protease n=126 Tax=Clostridium difficile RepID=C9XJN4_CLODC
64_010_scaffold_327_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15420..15836)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium difficile Y384 RepID=T4HNA2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI83494.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
hypothetical protein
64_010_scaffold_327_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15852..16211
DNA (360bp) protein (120aa)
Helix-turn-helix family protein n=13 Tax=Clostridium difficile RepID=T3DIZ1_CLODI
Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CCL22265.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
64_010_scaffold_327_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16159..16488)
DNA (330bp) protein (110aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=T4NM17_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL22266.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
64_010_scaffold_327_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16633..17955)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=34 Tax=Clostridium difficile RepID=T2TUG9_CLODI
MATE efflux family protein {ECO:0000313|EMBL:EQI83497.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
effD; efflux pump
64_010_scaffold_327_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18044..18697)
DNA (654bp) protein (218aa)
Iron dependent repressor, N-terminal DNA binding domain protein n=38 Tax=Clostridium difficile RepID=T2TSR1_CLODI
Iron dependent repressor, N-terminal DNA binding domain protein {ECO:0000313|EMBL:EQI83498.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
effR; MarR family transcriptional regulator
64_010_scaffold_327_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18834..19229)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Clostridium difficile RepID=Q93QZ5_CLODI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAK77647.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_327_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19211..19495)
DNA (285bp) protein (95aa)
Uncharacterized protein n=12 Tax=Clostridium difficile RepID=T2TS33_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI83499.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Cna protein B-type domain.
64_010_scaffold_327_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19667..20335)
DNA (669bp) protein (223aa)
Uncharacterized protein n=29 Tax=Clostridium difficile RepID=T2TYV1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQH99646.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
collagen-binding surface protein
64_010_scaffold_327_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20883..21695)
DNA (813bp) protein (271aa)
HydD n=124 Tax=Clostridium difficile RepID=Q93QZ6_CLODI
hydD; hydrolase
Dienelactone hydrolase family protein {ECO:0000313|EMBL:EQH99647.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
64_010_scaffold_327_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21721..22350)
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=49 Tax=Clostridium difficile RepID=Q187X9_CLOD6
hydR; TetR family transcriptional regulator
HydR {ECO:0000313|EMBL:AAK77645.1}; TetR family transcriptional regulator {ECO:0000313|EMBL:CKH19124.1}; Transcriptional regulator, TetR family {ECO:0000313|EMBL:CEJ98600.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
64_010_scaffold_327_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22694..24349)
DNA (1656bp) protein (552aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=43 Tax=Clostridium difficile RepID=T2TLX4_CLODI
Displaying items 1-30 of 31 in total

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