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64_010_scaffold_233_5

Organism: 64_010_Peptoclostridium_difficile_29_16

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(5536..6285)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=75 Tax=Clostridium difficile RepID=T3IEE5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 249.0
  • Bit_score: 498
  • Evalue 2.80e-138
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 249.0
  • Bit_score: 498
  • Evalue 8.90e-139
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CCL24133.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 249.0
  • Bit_score: 498
  • Evalue 4.00e-138

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 750
ATGAGATTAGAATCGTTAGTTAACCAAAATTATGATAATTTAAATGAAAATGATAAAATTATTATTAAACAAATATTGATTTGTCAAAGAGAATACCGTAATTTTTCGTGTGAAAAAATTGCAAATGAATGTAATGTTTCTAGAGCTACTTTATTAAGGCTTTGTAGAAAAATTGGATTAGATTCATTCTCTGATTTAAAGTATTTACTTAAAAATAATCAACTAGAATTTGTTAATAATGATAATAATTTTCATGATGTTTGCGAGAATTATCGACTATTAATGAATGAATTACAAAAAATATCATTTCAAGATATTTGTAAAATAATATATGATGCAGAAACAATTTATATTTATGGGACAGGTAATGAACAGAAAAGTTTAGCTCAAGAAATAAAGAGAATATTTCTTTCAGTAGGTAAATGTGTTATTGACTTATTTGATATAGGTGAAATTGAATTTATGAGAGAATCATTTCAAAAAAATGATTTATTTATTATCATTTCTTTGTCTGGAGAAACAAAAGCAGGAATTGAAATTGCAAAATTTATCAACAATCATATACATACGATTTCTTTAACTAGGCTTGATAATAATACAATTGCAACACTTTGTGAGTATAATCTGTATGTTGAAACGCAAAAACTTGATACATTACAAGCTATATCTTATGAAGTCGTAGGAGCATTTTATGCTCTATTAGATTTGCTTCATATGAATTACATAGAGTATAGAAGGAGAAAAGAATGA
PROTEIN sequence
Length: 250
MRLESLVNQNYDNLNENDKIIIKQILICQREYRNFSCEKIANECNVSRATLLRLCRKIGLDSFSDLKYLLKNNQLEFVNNDNNFHDVCENYRLLMNELQKISFQDICKIIYDAETIYIYGTGNEQKSLAQEIKRIFLSVGKCVIDLFDIGEIEFMRESFQKNDLFIIISLSGETKAGIEIAKFINNHIHTISLTRLDNNTIATLCEYNLYVETQKLDTLQAISYEVVGAFYALLDLLHMNYIEYRRRKE*