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64_010_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 117 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_44_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1669)
DNA (1668bp) protein (556aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium beijerinckii RepID=UPI0003136038
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ETD71452.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
64_010_scaffold_44_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1723..3372)
DNA (1650bp) protein (550aa)
DAK2 domain fusion protein YloV n=1 Tax=Clostridium colicanis 209318 RepID=N9Y1R0_9CLOT
DAK2 domain fusion YloV family protein {ECO:0000313|EMBL:AIY82303.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
DAK2 domain-containing protein; K07030
64_010_scaffold_44_3
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3384..3734)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WFB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01746.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
64_010_scaffold_44_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


3932..4123
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=3 Tax=Clostridium RepID=R9CEJ6_9CLOT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
rpmB; 50S ribosomal protein L28
64_010_scaffold_44_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4397..5032)
DNA (636bp) protein (212aa)
Thiamine pyrophosphokinase {ECO:0000313|EMBL:AIY83305.1}; EC=2.7.6.2 {ECO:0000313|EMBL:AIY83305.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase [EC:2.7.6.2]
Thiamine pyrophosphokinase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G5X5_CLOPA
64_010_scaffold_44_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5032..5682)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:AIY80063.1}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:AIY80063.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium intestinale URNW RepID=U2NMI5_9CLOT
64_010_scaffold_44_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5676..6545)
DNA (870bp) protein (290aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rsgA1; putative ribosome biogenesis GTPase RsgA (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EK14_9CLOT
64_010_scaffold_44_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6678..8648)
DNA (1971bp) protein (657aa)
protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TPP2_9CLOT
Tyrosine kinase family protein {ECO:0000313|EMBL:AIY84600.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
64_010_scaffold_44_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8650..9369)
DNA (720bp) protein (240aa)
protein phosphatase PrpC; K01090 protein phosphatase [EC:3.1.3.16]
Protein serine/threonine phosphatase n=1 Tax=Clostridium sp. DL-VIII RepID=G7LYE9_9CLOT
Protein serine/threonine phosphatase {ECO:0000313|EMBL:EHI98441.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
64_010_scaffold_44_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9390..10433)
DNA (1044bp) protein (348aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}
ribosomal RNA large subunit methyltransferase N; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FLS0_9CLOT
64_010_scaffold_44_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10442..11761)
DNA (1320bp) protein (440aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSJ3_CLOSA
64_010_scaffold_44_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11774..12463)
DNA (690bp) protein (230aa)
Conserved protein YugP n=4 Tax=Clostridium botulinum RepID=B2THS3_CLOBB
hypothetical protein; K06973
Conserved protein YugP {ECO:0000313|EMBL:ACD23829.1}; Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:CDH90135.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
64_010_scaffold_44_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12478..13404)
DNA (927bp) protein (309aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
fmt; methionyl-tRNA formyltransferase Fmt (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7N7_9CLOT
64_010_scaffold_44_14
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13422..13865)
DNA (444bp) protein (148aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
def; peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEK4_9CLOT
64_010_scaffold_44_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13877..16084)
DNA (2208bp) protein (736aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
priA; primosome assembly protein PriA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
Primosomal protein N n=2 Tax=Clostridium butyricum RepID=B1R2X3_CLOBU
64_010_scaffold_44_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16130..17320)
DNA (1191bp) protein (397aa)
coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5]
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H417_9CLOT
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EEH98195.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
64_010_scaffold_44_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17323..17541)
DNA (219bp) protein (73aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
DNA-directed RNA polymerase subunit omega n=1 Tax=Clostridium intestinale URNW RepID=U2NPG4_9CLOT
64_010_scaffold_44_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17534..18157)
DNA (624bp) protein (208aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
gmk; guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EZ18_9CLOT
64_010_scaffold_44_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18159..18428)
DNA (270bp) protein (90aa)
UPF0296 protein CLL_A1210 n=2 Tax=Clostridium botulinum B RepID=Y1210_CLOBB
hypothetical protein; K09777 hypothetical protein
UPF0296 protein CLL_A1210 {ECO:0000255|HAMAP-Rule:MF_01503}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
64_010_scaffold_44_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18448..19329)
DNA (882bp) protein (294aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2X8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETI91308.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
64_010_scaffold_44_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20042..21409)
DNA (1368bp) protein (456aa)
Inner membrane protein YicO n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXW5_CLOBO
inner membrane protein YicO; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease
Inner membrane protein YicO {ECO:0000313|EMBL:EES50587.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
64_010_scaffold_44_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21674..22669)
DNA (996bp) protein (332aa)
ansA; type II L-asparaginase; K01424 L-asparaginase [EC:3.5.1.1]
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y1P4_9CLOT
Asparaginase family protein {ECO:0000313|EMBL:AIY85125.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
64_010_scaffold_44_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22862..23263)
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JJB2_CLOBU
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS {ECO:0000313|EMBL:KJZ84601.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
64_010_scaffold_44_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23414..24439
DNA (1026bp) protein (342aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ilvE; branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
Branched-chain-amino-acid aminotransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q6J0_9CLOT
64_010_scaffold_44_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24472..25980)
DNA (1509bp) protein (503aa)
spoIVA; stage IV sporulation protein A (EC:3.6.1.3)
Stage IV sporulation protein A n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FLR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJZ82956.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
64_010_scaffold_44_26
unknown

Not on your lists

26195..26719
DNA (525bp) protein (175aa)

This feature has no annotations

64_010_scaffold_44_27
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26751..27743)
DNA (993bp) protein (331aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; Flags: Precursor;; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium sp. DL-VIII RepID=G7MCS5_9CLOT
64_010_scaffold_44_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27743..29062)
DNA (1320bp) protein (440aa)
GTPase Der n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U0N2_9CLOT
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
engA; GTP-binding protein EngA
64_010_scaffold_44_29
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29062..30396)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y1P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01722.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
64_010_scaffold_44_30
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30602..32599)
DNA (1998bp) protein (666aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CAA9_9CLOT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EOC99269.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
methyl-accepting chemotaxis sensory transducer with Cache sensor; K03406 methyl-accepting chemotaxis protein
Displaying items 1-30 of 117 in total

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