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64_010_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_92_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102..308)
DNA (207bp) protein (69aa)
Excisionase n=1 Tax=Clostridium difficile RepID=V5ZEM7_CLODI
Excisionase {ECO:0000313|EMBL:CDF47257.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
excisionase
64_010_scaffold_92_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(301..1533)
DNA (1233bp) protein (411aa)
Putative topoisomerase n=1 Tax=Clostridium difficile RepID=V5ZEW3_CLODI
Putative topoisomerase {ECO:0000313|EMBL:CDF47258.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
64_010_scaffold_92_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1970..2590
DNA (621bp) protein (207aa)
DNA-binding helix-turn-helix protein n=11 Tax=Firmicutes RepID=E2SHM4_9FIRM
Transcriptional regulator, PbsX family {ECO:0000313|EMBL:EGB93684.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted transcriptional regulator
64_010_scaffold_92_4
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2932..3567
DNA (636bp) protein (212aa)
Putative TetR family transcriptional regulator n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SBM9_9FIRM
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:CDC58563.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
putative TetR family transcriptional regulator
64_010_scaffold_92_5
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3674..4912
DNA (1239bp) protein (413aa)
Major facilitator superfamily transporter n=9 Tax=Firmicutes RepID=R6ST56_9FIRM
Major facilitator superfamily transporter {ECO:0000313|EMBL:CDC58561.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
macrolide-efflux protein; K08217 MFS transporter, DHA3 family, macrolide efflux protein
64_010_scaffold_92_6
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5139..5558
DNA (420bp) protein (140aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Firmicutes RepID=R2DPH9_ENTFC
Sigma-70 region 4 {ECO:0000313|EMBL:CDC58559.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
64_010_scaffold_92_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5563..5802
DNA (240bp) protein (80aa)
Uncharacterized protein n=13 Tax=Firmicutes RepID=E2SHM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05226.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
64_010_scaffold_92_8
unknown

Not on your lists

6042..6164
DNA (123bp) protein (41aa)

This feature has no annotations

64_010_scaffold_92_9
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6195..7199
DNA (1005bp) protein (335aa)
Aminoglycoside phosphotransferase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PU21_9CLOT
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EET87221.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
aminoglycoside phosphotransferase
64_010_scaffold_92_10
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7237..7788
DNA (552bp) protein (184aa)
Acetyltransferase (Isoleucine patch superfamily) protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCD3_9GAMM
Acetyltransferase (Isoleucine patch superfamily) protein {ECO:0000313|EMBL:EAR10199.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
hypothetical protein
64_010_scaffold_92_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8010..8774
DNA (765bp) protein (255aa)
Ferredoxin n=2 Tax=Clostridium botulinum B RepID=B2TPS9_CLOBB
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ACD22373.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
64_010_scaffold_92_12
unknown

Not on your lists

comp(8889..9170)
DNA (282bp) protein (94aa)

This feature has no annotations

64_010_scaffold_92_13
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9286..11196)
DNA (1911bp) protein (637aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YUF1_9CLOT
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB94521.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
64_010_scaffold_92_14
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11189..12940)
DNA (1752bp) protein (584aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YUF0_9CLOT
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB94520.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
multidrug ABC transporter ATPase/permease
64_010_scaffold_92_15
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13045..13557)
DNA (513bp) protein (171aa)
Transcriptional regulator n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A894_DESDJ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFM00179.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
64_010_scaffold_92_16
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13643..14275
DNA (633bp) protein (211aa)
CAAX amino terminal protease family protein n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TAU6_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EGL38533.1}; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 110 str. F0139.;"
CAAX amino terminal protease
64_010_scaffold_92_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14296..15600
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum F RepID=A7GBB2_CLOBL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS39573.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
64_010_scaffold_92_18
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15694..16512
DNA (819bp) protein (273aa)
Acetyltransferase GNAT family protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PVV2_9BACT
GNAT family acetyltransferase {ECO:0000313|EMBL:ETT65984.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
64_010_scaffold_92_19
unknown

Not on your lists

16578..16925
DNA (348bp) protein (116aa)

This feature has no annotations

64_010_scaffold_92_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16946..17698
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QQH7_SPHPG
Uncharacterized protein {ECO:0000313|EMBL:KJU73031.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
64_010_scaffold_92_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17777..18739)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTN8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14967.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein; K06889
64_010_scaffold_92_22
unknown

Not on your lists

18920..19147
DNA (228bp) protein (76aa)

This feature has no annotations

64_010_scaffold_92_23
unknown

Not on your lists

comp(19048..19290)
DNA (243bp) protein (81aa)

This feature has no annotations

64_010_scaffold_92_24
unknown

Not on your lists

comp(19281..19484)
DNA (204bp) protein (68aa)

This feature has no annotations

64_010_scaffold_92_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19503..20018
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97315.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
GCN5-like N-acetyltransferase
64_010_scaffold_92_26
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20103..21452
DNA (1350bp) protein (450aa)
Radical SAM domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SV04_CLOC7
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ADL52979.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
64_010_scaffold_92_27
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21477..22106
DNA (630bp) protein (210aa)
Phosphatase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0M9_9CLOT
Phosphatase {ECO:0000313|EMBL:EOR20776.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
phosphatase
64_010_scaffold_92_28
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22131..23099
DNA (969bp) protein (323aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFM1_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EKY26377.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative transcriptional regulator
64_010_scaffold_92_29
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23137..24486)
DNA (1350bp) protein (450aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM12_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EKY28750.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
[Fe] hydrogenase
64_010_scaffold_92_30
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(24591..24755)
DNA (165bp) protein (55aa)
Rubredoxin n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LTY8_HIPMA
rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1161912 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho africanus H17ap60334.;"
Displaying items 1-30 of 79 in total

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