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64_010_scaffold_102

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Displaying items 1-30 of 71 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_102_1
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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155..2065
DNA (1911bp) protein (637aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
yvrG1; sensor histidine kinase YvrG (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium intestinale URNW RepID=U2N3C5_9CLOT
64_010_scaffold_102_2
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2070..4091
DNA (2022bp) protein (674aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
Sensory box histidine kinase n=1 Tax=Clostridium intestinale URNW RepID=U2N7E2_9CLOT
sensory box histidine kinase
64_010_scaffold_102_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4153..4659
DNA (507bp) protein (169aa)
Putative TspO/MBR family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FNB0_9CLOT
Putative TspO/MBR family protein {ECO:0000313|EMBL:CDG02134.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
TspO/MBR family protein; K07185 tryptophan-rich sensory protein
64_010_scaffold_102_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4915..5769
DNA (855bp) protein (285aa)
Transcriptional antiterminator, BglG family n=2 Tax=Clostridium botulinum B RepID=B2TR32_CLOBB
transcription antiterminator LicT; K03480 transcriptional antiterminator
Transcriptional antiterminator {ECO:0000313|EMBL:CDH92317.1}; Transcriptional antiterminator, BglG family {ECO:0000313|EMBL:ACD22356.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
64_010_scaffold_102_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5854..8010
DNA (2157bp) protein (719aa)
DNA topoisomerase; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWD3_CLOBA
DNA topoisomerase {ECO:0000313|EMBL:EES50985.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
64_010_scaffold_102_6
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8086..8583
DNA (498bp) protein (166aa)
putative thiol peroxidase; K11065 thiol peroxidase, atypical 2-Cys peroxiredoxin [EC:1.11.1.15]
Lipid hydroperoxide peroxidase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CA75_9CLOT
Lipid hydroperoxide peroxidase {ECO:0000313|EMBL:EOR26188.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
64_010_scaffold_102_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8636..9349)
DNA (714bp) protein (238aa)
membrane protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002F9DD2B
Membrane protein {ECO:0000313|EMBL:ETD68483.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
LrgB family protein
64_010_scaffold_102_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9333..9716)
DNA (384bp) protein (128aa)
LrgA family protein n=2 Tax=Clostridium botulinum B RepID=B2TNL5_CLOBB
LrgA family protein; K06518 holin-like protein
LrgA family protein {ECO:0000313|EMBL:ACD24169.1}; Putative membrane protein {ECO:0000313|EMBL:CDH91539.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
64_010_scaffold_102_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9916..10236
DNA (321bp) protein (107aa)
Putative transcriptional regulator n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT51_CLOP1
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:EDT73059.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
64_010_scaffold_102_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10249..11493
DNA (1245bp) protein (415aa)
cytochrome C biogenesis protein n=1 Tax=Clostridium botulinum RepID=UPI000303CE61
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KIL07615.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
cytochrome C biogenesis protein transmembrane region family; K06196 cytochrome c-type biogenesis protein
64_010_scaffold_102_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11537..12346)
DNA (810bp) protein (270aa)
ABC transporter, permease protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWD0_CLOBA
Sulfonate ABC transporter permease {ECO:0000313|EMBL:KJU73069.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
64_010_scaffold_102_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12325..13083)
DNA (759bp) protein (253aa)
Taurine import ATP-binding protein TauB {ECO:0000313|EMBL:EEP52995.1}; EC=3.6.3.36 {ECO:0000313|EMBL:EEP52995.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Taurine import ATP-binding protein TauB n=4 Tax=Clostridium butyricum RepID=B1QTV7_CLOBU
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
64_010_scaffold_102_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13195..14214)
DNA (1020bp) protein (340aa)
nitrate ABC transporter substrate-binding protein n=1 Tax=Clostridium botulinum RepID=UPI000371E43B
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJU72729.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein
64_010_scaffold_102_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14504..15430)
DNA (927bp) protein (309aa)
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase, pyridine binding subunit n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZZ7_CLOBA
Transketolase, pyridine binding subunit {ECO:0000313|EMBL:EES50840.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
64_010_scaffold_102_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15430..16272)
DNA (843bp) protein (281aa)
transketolase; K00615 transketolase [EC:2.2.1.1]
transketolase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287A7CC
Uncharacterized protein {ECO:0000313|EMBL:EEH99519.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
64_010_scaffold_102_16
Geobacillus thermodenitrificans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16443..17435
DNA (993bp) protein (331aa)
Transcriptional repressor of the ribose operon n=2 Tax=Geobacillus RepID=A4IT66_GEOTN
transcriptional repressor of the ribose operon; K02529 LacI family transcriptional regulator
Transcriptional repressor of the ribose operon {ECO:0000313|EMBL:ABO68520.1}; TaxID=420246 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus thermodenitrificans (strain NG80-2).;"
64_010_scaffold_102_17
Lactobacillus jensenii, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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17654..18562
DNA (909bp) protein (303aa)
ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15]
Ribokinase n=3 Tax=Lactobacillus jensenii RepID=U5F1P8_9LACO
Putative ribokinase {ECO:0000313|EMBL:EFH30246.1}; TaxID=525329 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus jensenii JV-V16.;"
64_010_scaffold_102_18
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18586..19512
DNA (927bp) protein (309aa)
ribonucleoside hydrolase RihC (EC:3.2.2.1); K12700 non-specific riboncleoside hydrolase [EC:3.2.-.-]
ribonucleoside hydrolase n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002FBD7F8
Non-specific ribonucleoside hydrolase RihC {ECO:0000313|EMBL:ETK29014.1}; TaxID=697286 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25719.;"
64_010_scaffold_102_19
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19536..20894
DNA (1359bp) protein (453aa)
Transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family n=2 Tax=Paenibacillus RepID=F5LRN1_9BACL
Transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family {ECO:0000313|EMBL:EGL15001.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
anaerobic C4-dicarboxylate transporter; K03326 C4-dicarboxylate transporter, DcuC family
64_010_scaffold_102_20
Bacillus manliponensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20899..21372
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI000306E640
Uncharacterized protein {ECO:0000313|EMBL:KEK17205.1}; TaxID=574376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus manliponensis.;"
64_010_scaffold_102_21
Listeria booriae, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21387..22034
DNA (648bp) protein (216aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1552123 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria booriae.;"
Probable transaldolase n=2 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=D9TLQ6_THETC
fructose-6-phosphate aldolase, TalC/MipB family
64_010_scaffold_102_22
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22298..22762
DNA (465bp) protein (155aa)
GCN5-related N-acetyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U4L4_ETHHY
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU26642.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
64_010_scaffold_102_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22856..23167
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ86_CLOPF
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
trx; thioredoxin; K03671 thioredoxin 1
64_010_scaffold_102_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23182..24039
DNA (858bp) protein (286aa)
UPI0003D59403 related cluster n=1 Tax=unknown RepID=UPI0003D59403
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:ETI90083.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
thioredoxin reductase
64_010_scaffold_102_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24134..24382)
DNA (249bp) protein (83aa)
Spore coat protein F n=2 Tax=Clostridium botulinum B RepID=B2TRT4_CLOBB
Coat F domain protein {ECO:0000313|EMBL:AIY81314.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
spore coat protein CotF
64_010_scaffold_102_26
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24396..24581)
DNA (186bp) protein (62aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=Q8XNS9_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:CDM68248.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
hypothetical protein
64_010_scaffold_102_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24775..25290
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98567.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
DedA family protein
64_010_scaffold_102_28
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25303..26529
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H819_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98566.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
group 1 glycosyl transferase
64_010_scaffold_102_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26510..27124
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3J6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98565.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein; K09778 hypothetical protein
64_010_scaffold_102_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27237..27941
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98564.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
two-component response regulator
Displaying items 1-30 of 71 in total

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