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64_010_scaffold_183

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_183_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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198..1187
DNA (990bp) protein (330aa)
Enzyme involved in biofilm formation {ECO:0000313|EMBL:CDS89235.1}; EC=1.-.-.- {ECO:0000313|EMBL:CDS89235.1};; Oxidoreductase {ECO:0000313|EMBL:CKH89362.1}; EC=1.1.1.292 {ECO:0000313|EMBL:CKH89362.1};; Putative NAD(P)-binding oxidoreductase {ECO:0000313|EMBL:CDS88633.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Oxidoreductase , NAD-binding Rossmann fold family protein n=174 Tax=Clostridium difficile RepID=T3G9C5_CLODC
oxidoreductase
64_010_scaffold_183_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1224..2291)
DNA (1068bp) protein (356aa)
2-nitropropane dioxygenase (EC:1.13.12.16)
2-nitropropane dioxygenase-like enzyme n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U3H1_9CLOT
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:EKQ55067.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
64_010_scaffold_183_trna_1
unknown

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2455..2526
DNA (72bp)
transferRNA Trp
64_010_scaffold_183_3
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2786..3931
DNA (1146bp) protein (382aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIP9_9CLOT
glycoside hydrolase family protein
64_010_scaffold_183_4
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4066..4248
DNA (183bp) protein (61aa)
Small, acid-soluble spore protein 1 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQA6_CLOSA
ssp; small, acid-soluble spore protein 1
Small, acid-soluble spore protein 1 {ECO:0000313|EMBL:AGX41607.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
64_010_scaffold_183_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4636..5769
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H488_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99196.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
mppE; putative metallophosphoesterase MppE
64_010_scaffold_183_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5759..8461
DNA (2703bp) protein (901aa)
AAA domain protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLC6_CLOSA
AAA domain protein {ECO:0000313|EMBL:AIY84137.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
AAA domain protein
64_010_scaffold_183_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8718..9632
DNA (915bp) protein (305aa)
Putative Periplasmic solute binding protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ETN7_9CLOT
Putative Periplasmic solute binding protein {ECO:0000313|EMBL:CDG02610.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ABC transporter substrate-binding protein; K09815 zinc transport system substrate-binding protein
64_010_scaffold_183_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9856..11646
DNA (1791bp) protein (597aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPJ9_CLOSA
MutS domain V family protein {ECO:0000313|EMBL:AIY85195.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
mutS1; DNA mismatch repair protein MutS
64_010_scaffold_183_9
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11761..12165
DNA (405bp) protein (135aa)
CBS-domain-containing membrane protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM61_CLOSA
CBS-domain-containing membrane protein
CBS-domain-containing membrane protein {ECO:0000313|EMBL:AGX41613.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
64_010_scaffold_183_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12325..12594
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWH2_CLOPS
Copper-sensing transcriptional repressor CsoR {ECO:0000313|EMBL:KJU73198.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
64_010_scaffold_183_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12618..14846
DNA (2229bp) protein (743aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium colicanis 209318 RepID=N9WEP1_9CLOT
ATPase {ECO:0000313|EMBL:KJU73199.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
64_010_scaffold_183_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14879..15088
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZI5_9CLOT
Heavy-metal-associated domain protein {ECO:0000313|EMBL:AIY84277.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
heavy metal binding protein
64_010_scaffold_183_13
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15241..15894)
DNA (654bp) protein (218aa)
Phage shock protein A (IM30), suppresses sigma54-dependent transcription n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAC8_9CLOT
Phage shock protein A (IM30), suppresses sigma54-dependent transcription {ECO:0000313|EMBL:EKQ55084.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
phage shock protein A (PspA) family protein
64_010_scaffold_183_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16242..17387
DNA (1146bp) protein (382aa)
ispH2; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH (EC:1.17.1.2)
Putative 30S ribosomal protein S1 n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2S0_9CLOT
Putative 30S ribosomal protein S1 {ECO:0000313|EMBL:EKY22284.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
64_010_scaffold_183_15
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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17636..18043
DNA (408bp) protein (136aa)
Transcriptional regulator, PadR family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D4F2_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ERI91655.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
PadR family transcriptional regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR
64_010_scaffold_183_16
unknown

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18049..18765
DNA (717bp) protein (239aa)

This feature has no annotations

64_010_scaffold_183_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19049..20467)
DNA (1419bp) protein (473aa)
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Pyruvate kinase n=2 Tax=Clostridium RepID=A6LQP3_CLOB8
64_010_scaffold_183_18
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20645..22096
DNA (1452bp) protein (484aa)
aminoacyl-histidine dipeptidase; K01270 dipeptidase D [EC:3.4.13.-]
Xaa-His dipeptidase n=1 Tax=Clostridium colicanis 209318 RepID=N9XZH5_9CLOT
Xaa-His dipeptidase {ECO:0000313|EMBL:ENZ01304.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
64_010_scaffold_183_19
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22383..22562
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XNL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01303.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
64_010_scaffold_183_20
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22767..23276
DNA (510bp) protein (170aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TK52_CLOBB
GNAT family acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ACD24031.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
64_010_scaffold_183_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23422..24051
DNA (630bp) protein (210aa)
lytF; endopeptidase LytF (EC:3.4.-.-)
Cell wall-associated hydrolase, invasion-associated protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAC9_9CLOT
Cell wall-associated hydrolase, invasion-associated protein {ECO:0000313|EMBL:EKQ55089.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
64_010_scaffold_183_22
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24288..24974
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y0E7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01302.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
sporulation-associated protein
64_010_scaffold_183_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25182..25748
DNA (567bp) protein (189aa)
Maf-like protein CLH_0546 n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=Y546_CLOBA
maf; Maf-like protein; K06287 septum formation protein
Maf-like protein CLH_0546 {ECO:0000255|HAMAP-Rule:MF_00528}; TaxID=508767 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Alaska E43 / Type E3).;"
64_010_scaffold_183_24
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25783..26472
DNA (690bp) protein (230aa)
DNA repair protein RadC n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAB5_9CLOT
DNA repair protein RadC {ECO:0000313|EMBL:EHJ02026.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
radC; DNA replication and repair protein RadC
64_010_scaffold_183_25
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26492..27505
DNA (1014bp) protein (338aa)
MreB/Mrl family cell shape determining protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZH1_9CLOT
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:ENZ01299.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
mreB2; Rod shape-determining protein MreB
64_010_scaffold_183_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27516..28361
DNA (846bp) protein (282aa)
Rod shape-determining protein MreC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H509_9CLOT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
64_010_scaffold_183_27
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28374..28865
DNA (492bp) protein (164aa)
Rod shape-determining protein MreD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQC2_CLOSA
mreD; Rod shape-determining protein MreD
Rod shape-determining protein MreD {ECO:0000313|EMBL:AGX41627.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
64_010_scaffold_183_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28862..31723
DNA (2862bp) protein (954aa)
Penicillin-binding protein, transpeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7H3_CLOBU
Penicillin-binding protein {ECO:0000313|EMBL:KHD14489.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
penicillin-binding Protein dimerisation domain family; K05515 penicillin-binding protein 2
64_010_scaffold_183_29
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31933..32580
DNA (648bp) protein (216aa)
Probable septum site-determining protein MinC n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ETM1_9CLOT
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
minC; septum formation inhibitor; K03610 septum site-determining protein MinC
Displaying items 1-30 of 45 in total

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