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64_010_scaffold_256

Search features with annotation key words

Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_256_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1198
DNA (1197bp) protein (399aa)
Surface protein PspC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N013_CLOSA
pspC4; surface protein PspC
Surface protein PspC {ECO:0000313|EMBL:AGX45112.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
64_010_scaffold_256_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1635..2993
DNA (1359bp) protein (453aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Clostridium leptum CAG:27 RepID=R6NBE9_9CLOT
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CDC05619.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
64_010_scaffold_256_3
Firmicutes bacterium CAG:321, Firmicutes, Bacteria

Not on your lists

3052..3954
DNA (903bp) protein (301aa)
LPS biosynthesis protein; K07271 lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
UPI0002E08C8D related cluster n=1 Tax=unknown RepID=UPI0002E08C8D
LicD family protein {ECO:0000313|EMBL:CDE39337.1}; TaxID=1263018 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:321.;"
64_010_scaffold_256_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3968..5383
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2J2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96871.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
O-antigen polymerase family
64_010_scaffold_256_5
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5376..6398
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N9C1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB88411.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
family 2 glycosyl transferase
64_010_scaffold_256_6
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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6398..7882
DNA (1485bp) protein (495aa)
Polysaccharide biosynthesis protein n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TC93_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EGL38615.1}; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 110 str. F0139.;"
polysaccharide biosynthesis protein
64_010_scaffold_256_7
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7889..9010
DNA (1122bp) protein (374aa)
Glycosyl transferase, group 1 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASH8_9CLOT
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EOD00103.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
64_010_scaffold_256_8
Clostridium sp. CAG:302, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9031..10098
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:302 RepID=R6M0U0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB91950.1}; TaxID=1262793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:302.;"
putative lipoprotein
64_010_scaffold_256_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11053..11634
DNA (582bp) protein (194aa)
Transposition helper protein n=3 Tax=Clostridium sartagoforme RepID=Q5EDC6_9CLOT
Transposition helper protein {ECO:0000313|EMBL:AAX07160.1}; TaxID=84031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme.;"
IstB domain-containing protein ATP-binding protein
64_010_scaffold_256_10
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11833..12570
DNA (738bp) protein (246aa)
Nucleotidyl transferase/aminotransferase n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZLD6_CLOB0
nucleotidyl transferase/aminotransferase
Putative nucleotidyl transferase {ECO:0000313|EMBL:AAO36239.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).;"
64_010_scaffold_256_11
Pontibacillus halophilus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12596..13603
DNA (1008bp) protein (336aa)
Putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JL02_FUSVA
Phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGX94021.1}; TaxID=1385510 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus halophilus JSM 076056 = DSM 19796.;"
ABC transporter substrate-binding protein; K02012 iron(III) transport system substrate-binding protein
64_010_scaffold_256_12
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

13605..14582
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PX98_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO78466.2}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
ABC transporter ATP-binding protein
64_010_scaffold_256_13
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

14575..16224
DNA (1650bp) protein (550aa)
Putative 2-aminoethylphosphonate ABC transporter, permease protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJR5_FUSVA
Putative 2-aminoethylphosphonate ABC transporter, permease protein {ECO:0000313|EMBL:EES64978.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
transport system permease, iron(III) or 2-aminoethylphosphonate transport; K02011 iron(III) transport system permease protein
64_010_scaffold_256_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16301..17275
DNA (975bp) protein (325aa)
Protein LicA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWD7_CLOSA
licA; protein LicA
Protein LicA {ECO:0000313|EMBL:AGX45109.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
64_010_scaffold_256_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17387..17737
DNA (351bp) protein (117aa)
ISBma2, transposase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BS41_9CLOT
ISBma2, transposase {ECO:0000313|EMBL:EOR19822.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ISBma2, transposase
64_010_scaffold_256_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17756..17932
DNA (177bp) protein (59aa)
ISBma2, transposase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BS41_9CLOT
ISBma2, transposase {ECO:0000313|EMBL:EOR19822.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
ISBma2-like transposase
64_010_scaffold_256_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18326..19645)
DNA (1320bp) protein (440aa)
Branched-chain amino acid transport system carrier protein BrnQ n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B055_CLOA9
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:AIY83110.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
brnQ; branched-chain amino acid transport system carrier protein BrnQ
64_010_scaffold_256_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19815..20681
DNA (867bp) protein (289aa)
gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
UTP--glucose-1-phosphate uridylyltransferase GtaB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX22_CLOSA
64_010_scaffold_256_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20705..21718)
DNA (1014bp) protein (338aa)
trpS; tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1.;"
Tryptophan--tRNA ligase n=1 Tax=Clostridium novyi (strain NT) RepID=A0PYI6_CLONN
64_010_scaffold_256_20
unknown

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comp(21823..21990)
DNA (168bp) protein (56aa)

This feature has no annotations

64_010_scaffold_256_21
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22131..22685
DNA (555bp) protein (185aa)
Membrane protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FXL7_CLOPA
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ETD68443.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
64_010_scaffold_256_22
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22740..22901)
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q942_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24426.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
64_010_scaffold_256_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23051..24133)
DNA (1083bp) protein (361aa)
Spore germination protein (Amino acid permease) n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2K4_9CLOT
Spore germination protein (Amino acid permease) {ECO:0000313|EMBL:EEH96886.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spore germination protein
64_010_scaffold_256_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24227..25648
DNA (1422bp) protein (474aa)
Spore germination protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UYN0_CLOBA
Spore gernimation protein GerK {ECO:0000313|EMBL:KJU72068.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
spore germination protein
64_010_scaffold_256_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25629..26744
DNA (1116bp) protein (372aa)
Ger(X)C family germination protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6N8_9CLOT
Ger(X)C family germination protein {ECO:0000313|EMBL:EEH96888.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spore germination protein
64_010_scaffold_256_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26879..27958
DNA (1080bp) protein (360aa)
histidine kinase n=1 Tax=Clostridium beijerinckii RepID=UPI0002E9A8B7
Diguanylate cyclase {ECO:0000313|EMBL:AJH01684.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
diguanylate cyclase
64_010_scaffold_256_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28356..28766
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU72065.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
64_010_scaffold_256_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28909..30129
DNA (1221bp) protein (407aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase n=2 Tax=Clostridium botulinum B RepID=SYY_CLOBB
64_010_scaffold_256_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30204..30833)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3W1_9CLOT
Potassium transporter TrkA {ECO:0000313|EMBL:KJU72063.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
TrkA domain-containing protein
64_010_scaffold_256_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30962..32830
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXI0_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KIL07963.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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