ggKbase home page

64_010_scaffold_297

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_297_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H428_9CLOT
Radical SAM protein {ECO:0000313|EMBL:KJU72637.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
cobalamin B12-binding domain-containing protein
64_010_scaffold_297_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114..617)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T1Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ53173.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
64_010_scaffold_297_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(749..2014)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UPN3_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES49562.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
64_010_scaffold_297_4
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2140..3255
DNA (1116bp) protein (372aa)
leucyl aminopeptidase (EC:3.4.11.-)
Aminopeptidase n=1 Tax=Clostridium sp. BL8 RepID=T0N6B5_9CLOT
Aminopeptidase {ECO:0000313|EMBL:EQB87326.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
64_010_scaffold_297_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3739..5238
DNA (1500bp) protein (500aa)
Stage V sporulation protein B n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UPN2_CLOBO
Stage V sporulation protein B {ECO:0000313|EMBL:AIY84859.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
spoVB; stage V sporulation protein B; K06409 stage V sporulation protein B
64_010_scaffold_297_6
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

5486..5944
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AKI0_SEBTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ09096.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
64_010_scaffold_297_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5996..7609)
DNA (1614bp) protein (538aa)
Stage V sporulation protein B n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTF9_CLOSA
spoVB3; stage V sporulation protein B
Stage V sporulation protein B {ECO:0000313|EMBL:AGX44069.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
64_010_scaffold_297_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7620..8588)
DNA (969bp) protein (323aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
RNA pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMC4_9CLOT
64_010_scaffold_297_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8653..9837)
DNA (1185bp) protein (395aa)
thermostable carboxypeptidase 1 (EC:3.4.17.-)
Amidohydrolase n=1 Tax=Clostridium colicanis 209318 RepID=N9WKC8_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:AIY84005.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
64_010_scaffold_297_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9859..11826)
DNA (1968bp) protein (656aa)
cell division protein FtsA n=1 Tax=Clostridium beijerinckii RepID=UPI00030FA3D3
Cell division protein FtsA {ECO:0000313|EMBL:KHD14083.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
actin-like ATPase involved in cell division
64_010_scaffold_297_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11942..13942)
DNA (2001bp) protein (667aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ATP-dependent helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMS6_CLOBU
64_010_scaffold_297_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14076..15551
DNA (1476bp) protein (492aa)
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LT38_CLOB8
64_010_scaffold_297_13
unknown

Not on your lists

comp(15651..15911)
DNA (261bp) protein (87aa)

This feature has no annotations

64_010_scaffold_297_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15978..17234)
DNA (1257bp) protein (419aa)
Putative Eal domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBD1_9CLOT
Putative Eal domain protein {ECO:0000313|EMBL:CDG02368.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
EAL domain-containing protein; K07181 putative signal transduction protein containing EAL and modified HD-GYP domains
64_010_scaffold_297_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17456..17779)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WKC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU72627.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
64_010_scaffold_297_16
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18229..18639
DNA (411bp) protein (137aa)
Transcriptional regulator PerR n=1 Tax=Clostridium colicanis 209318 RepID=N9Y554_9CLOT
Transcriptional regulator PerR {ECO:0000313|EMBL:ENZ03319.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Fur family transcriptional regulator; K09825 Fur family transcriptional regulator, peroxide stress response regulator
64_010_scaffold_297_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18720..19640
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TPB3_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23766.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
64_010_scaffold_297_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19784..20293)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MX98_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44082.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
64_010_scaffold_297_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20407..20682)
DNA (276bp) protein (92aa)
No significant homology n=1 Tax=Clostridium botulinum B str. Eklund 17B(NRP) RepID=U4PNI9_CLOBO
hypothetical protein
No significant homology {ECO:0000313|EMBL:CDH91791.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
64_010_scaffold_297_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20723..21139)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IKL5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54651.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
keratin associated protein 6-2-like protein
64_010_scaffold_297_21
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21290..21883)
DNA (594bp) protein (198aa)
Probable GTP-binding protein EngB n=1 Tax=Clostridium colicanis 209318 RepID=N9XUD7_9CLOT
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein
64_010_scaffold_297_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21873..24200)
DNA (2328bp) protein (776aa)
ATP-dependent protease La; K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
Lon protease n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LT30_CLOB8
64_010_scaffold_297_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24303..25985)
DNA (1683bp) protein (561aa)
lon2; Lon protease 2 (EC:3.4.21.53)
ATP-dependent protease LonB n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGF2_9CLOT
ATP-dependent protease LonB {ECO:0000313|EMBL:EEH99079.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
64_010_scaffold_297_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26188..27483)
DNA (1296bp) protein (432aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CE91_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
64_010_scaffold_297_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27512..28111)
DNA (600bp) protein (200aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Clostridium botulinum B RepID=CLPP_CLOBB
Displaying 25 items

View Taxonomy