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64_010_scaffold_316

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_316_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54..548)
DNA (495bp) protein (165aa)
NUDIX family hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22]
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WJ45_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03111.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
64_010_scaffold_316_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(602..1294)
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYU6_9CLOT
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
sfsA; sugar fermentation stimulation protein A; K06206 sugar fermentation stimulation protein A
64_010_scaffold_316_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1721..2044
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NA92_9CLOT
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:AIY83709.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
transcriptional regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR
64_010_scaffold_316_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2046..2723
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F6F3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDG00608.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
64_010_scaffold_316_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2723..3655
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0Q2_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD69995.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
64_010_scaffold_316_6
unknown

Not on your lists

comp(3687..4106)
DNA (420bp) protein (140aa)

This feature has no annotations

64_010_scaffold_316_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4204..4887)
DNA (684bp) protein (228aa)
Probable N-acetylmuramoyl-L-alanine amidase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZA9_CLOBA
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:AIY84659.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
N-acetylmuramoyl-L-alanine amidase
64_010_scaffold_316_8
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4930..5376)
DNA (447bp) protein (149aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
methionine sulfoxide reductase B; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Methionine sulfoxide reductase B n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0B3_CLOPA
64_010_scaffold_316_9
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

5466..6998
DNA (1533bp) protein (511aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase id=3837550 bin=GWF2_Clostridiales_36_10 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
64_010_scaffold_316_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7036..7941)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96649.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
acyl-CoA reductase/dehydratase
64_010_scaffold_316_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7951..9042)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96648.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein; K09963 hypothetical protein
64_010_scaffold_316_12
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9030..10289)
DNA (1260bp) protein (420aa)
PTS system, lactose/cellobiose-specific IIC component n=2 Tax=Erysipelothrix rhusiopathiae RepID=F5WTW8_ERYRF
PTS system lactose/cellobiose-specific transporter subunit IIC; K02761 PTS system, cellobiose-specific IIC component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae (strain Fujisawa).;"
64_010_scaffold_316_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10290..11444)
DNA (1155bp) protein (385aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKW2_9CLOT
64_010_scaffold_316_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11500..12399)
DNA (900bp) protein (300aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdema
murQ; N-acetylmuramic acid 6-phosphate etherase (EC:4.2.-.-); K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK7_9FIRM
64_010_scaffold_316_15
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12442..13476)
DNA (1035bp) protein (345aa)
membrane protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI000374BBB7
hypothetical protein; K09963 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK31905.1}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae (strain Fujisawa).;"
64_010_scaffold_316_16
Lactobacillus shenzhenensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13489..14775)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Lactobacillus shenzhenensis LY-73 RepID=U4TZI5_9LACO
PTS system lactose/cellobiose-specific transporter subunit IIC
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1231336 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus shenzhenensis LY-73.;"
64_010_scaffold_316_17
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

comp(14945..15997)
DNA (1053bp) protein (351aa)
Beta-lactamase family protein n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XEE5_9FIRM
Beta-lactamase family protein {ECO:0000313|EMBL:CDD21983.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
beta-lactamase family protein
64_010_scaffold_316_18
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16121..16339
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI00037BF49D
Uncharacterized protein {ECO:0000313|EMBL:EFY09593.1}; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae ATCC 19414.;"
hypothetical protein
64_010_scaffold_316_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16415..17251)
DNA (837bp) protein (279aa)
Putative Transcriptional regulator, RpiR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EWZ4_9CLOT
Putative Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CDG00751.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
RpiR family phosphosugar-binding transcriptional regulator
64_010_scaffold_316_20
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17322..18497)
DNA (1176bp) protein (392aa)
Sodium/proton antiporter, CPA1 family (TC 2.A.36) n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPG8_ACEAZ
sodium/proton antiporter
Sodium/proton antiporter, CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:ADL12409.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288).;"
64_010_scaffold_316_21
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18655..19557)
DNA (903bp) protein (301aa)
Cation efflux family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G629_9CLOT
Cation efflux family protein {ECO:0000313|EMBL:CDB16964.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
cation efflux family protein
64_010_scaffold_316_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19742..20476)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AA67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ96625.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
64_010_scaffold_316_23
unknown

Not on your lists

20596..20895
DNA (300bp) protein (100aa)

This feature has no annotations

64_010_scaffold_316_24
unknown

Not on your lists

21040..21366
DNA (327bp) protein (109aa)

This feature has no annotations

64_010_scaffold_316_25
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21465..22298)
DNA (834bp) protein (278aa)
hypothetical protein; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24T09_DESHY
Putative chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EHL04642.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
64_010_scaffold_316_26
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22328..22702
DNA (375bp) protein (125aa)
Uncharacterized protein n=45 Tax=root RepID=D6ZFX3_MOBCV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDR97109.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
64_010_scaffold_316_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23069..24988
DNA (1920bp) protein (640aa)
tetracycline resistance protein tetM n=1 Tax=Varibaculum cambriense RepID=UPI0003B3FD88
Tetracycline resistance protein tetO {ECO:0000313|EMBL:ETD26061.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
tetracycline resistance protein Tet
64_010_scaffold_316_28
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25701..26213
DNA (513bp) protein (171aa)
Sigma-70 region 4 domain protein n=36 Tax=Bacteria RepID=D9SLI1_CLOC7
putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
Uncharacterized protein {ECO:0000313|EMBL:ETD26062.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
64_010_scaffold_316_29
unknown

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comp(26026..26472)
DNA (447bp) protein (149aa)

This feature has no annotations

Displaying 29 items

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