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64_010_scaffold_492

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_492_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..541
DNA (540bp) protein (180aa)
Chromosome segregation protein SMC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H339_9CLOT
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
smc; chromosome partition protein Smc
64_010_scaffold_492_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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559..1470
DNA (912bp) protein (304aa)
Signal recognition particle receptor FtsY n=1 Tax=Clostridium colicanis 209318 RepID=N9Y0V3_9CLOT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
ftsY; signal recognition particle receptor FtsY
64_010_scaffold_492_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1552..1881
DNA (330bp) protein (110aa)
UPF0122 protein CCH01_008870 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EQU2_9CLOT
UPF0122 protein CCH01_008870 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
64_010_scaffold_492_4
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1901..3256
DNA (1356bp) protein (452aa)
Signal recognition particle protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WFC7_9CLOT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
ffh; signal recognition particle protein; K03106 signal recognition particle subunit SRP54
64_010_scaffold_492_5
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3293..3538
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=2 Tax=Clostridium RepID=R9CEI1_9CLOT
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
64_010_scaffold_492_6
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3585..3812
DNA (228bp) protein (76aa)
UPF0109 protein BN906_01342 n=1 Tax=Clostridium tetani 12124569 RepID=U6EXE2_CLOTA
UPF0109 protein BN906_01342 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
nucleic acid binding protein, containing KH domain; K06960
64_010_scaffold_492_7
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3871..4368
DNA (498bp) protein (166aa)
Ribosome maturation factor RimM n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MFD3_9CLOT
rimM; ribosome maturation factor RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
64_010_scaffold_492_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4358..5074
DNA (717bp) protein (239aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase TrmD (EC:2.1.1.228)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MPJ2_CLOSA
64_010_scaffold_492_9
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


5195..5542
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Clostridium colicanis 209318 RepID=N9WFD1_9CLOT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
64_010_scaffold_492_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5624..6466
DNA (843bp) protein (281aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QG79_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
rbgA; ribosomal biogenesis GTPase; K14540 ribosome biogenesis GTPase A
64_010_scaffold_492_11
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6483..7289
DNA (807bp) protein (269aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4]
Ribonuclease HII n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CDH6_9CLOT
64_010_scaffold_492_12
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7345..7710)
DNA (366bp) protein (122aa)
UPF0102 protein BN542_01741 n=1 Tax=Clostridium sp. CAG:221 RepID=R6FWV2_9CLOT
UPF0102 protein BN542_01741 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein; K07460 putative endonuclease
64_010_scaffold_492_13
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7854..9377
DNA (1524bp) protein (508aa)
Putative Mg chelatase family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FLV0_9CLOT
Putative Mg chelatase family protein {ECO:0000313|EMBL:CDG01609.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
64_010_scaffold_492_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9393..10460
DNA (1068bp) protein (356aa)
DNA protecting protein DprA n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UX87_CLOBO
DNA protecting protein DprA {ECO:0000313|EMBL:EES49649.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
dprA; DNA protecting protein DprA; K04096 DNA processing protein
64_010_scaffold_492_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10445..12547
DNA (2103bp) protein (701aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
topA; DNA topoisomerase 1 (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EZ56_9CLOT
64_010_scaffold_492_16
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12704..13480
DNA (777bp) protein (259aa)
GTP-sensing transcriptional pleiotropic repressor CodY n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EK42_9CLOT
GTP-sensing transcriptional pleiotropic repressor CodY {ECO:0000256|HAMAP-Rule:MF_00621, ECO:0000256|SAAS:SAAS00044533}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
transcriptional repressor CodY; K03706 transcriptional pleiotropic repressor
64_010_scaffold_492_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13879..14580
DNA (702bp) protein (234aa)
30S ribosomal protein S2 n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IJD4_CLOBU
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
rpsB; 30S ribosomal protein S2
64_010_scaffold_492_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14669..14767
DNA (99bp) protein (33aa)
Elongation factor Ts n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=EFTS_CLOPS
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
tsf; elongation factor Ts; K02357 elongation factor Ts
Displaying 18 items

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