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64_010_scaffold_284

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_284_1
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(378..1316)
DNA (939bp) protein (313aa)
1-phosphofructokinase {ECO:0000313|EMBL:EWC92964.1}; EC=2.7.1.56 {ECO:0000313|EMBL:EWC92964.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
1-phosphofructokinase (EC:2.7.1.56); K00882 1-phosphofructokinase [EC:2.7.1.56]
1-phosphofructokinase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W887_ATOPD
64_010_scaffold_284_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


1697..2137
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W885_ATOPD
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
64_010_scaffold_284_3
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


2141..2536
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W884_ATOPD
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
64_010_scaffold_284_4
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2766..4109
DNA (1344bp) protein (448aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W883_ATOPD
64_010_scaffold_284_5
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4134..4664
DNA (531bp) protein (177aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W882_ATOPD
64_010_scaffold_284_6
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4668..6293
DNA (1626bp) protein (542aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W881_ATOPD
YjeF family protein {ECO:0000313|EMBL:EWC94179.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
carbohydrate kinase
64_010_scaffold_284_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6303..7457
DNA (1155bp) protein (385aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W880_ATOPD
64_010_scaffold_284_8
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7457..8032
DNA (576bp) protein (192aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EWC94172.1}; EC=3.2.2.- {ECO:0000313|EMBL:EWC94172.1};; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Phage SPO1 DNA polymerase-related protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W879_ATOPD
64_010_scaffold_284_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8025..8591
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W878_ATOPD
tRNA threonylcarbamoyl adenosine modification protein YjeE {ECO:0000313|EMBL:EWC92965.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein; K06925 UPF0079 ATP-binding protein
64_010_scaffold_284_10
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8623..9039
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Streptococcus anginosus group RepID=T1ZEH9_STRIT
hypothetical protein
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EJP25074.1}; TaxID=1161422 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="Streptococcus anginosus SK1138.;"
64_010_scaffold_284_11
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9253..10071
DNA (819bp) protein (273aa)
SzPSe-like cell surface-anchored protein n=1 Tax=Streptococcus equi subsp. zooepidemicus (strain H70) RepID=C0MDN2_STRS7
Uncharacterized protein {ECO:0000313|EMBL:EWC94170.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
cell surface protein
64_010_scaffold_284_12
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10099..10998
DNA (900bp) protein (300aa)
Glycoprotein gp2 n=1 Tax=Equid herpesvirus 4 RepID=Q8V0L4_9ALPH
Uncharacterized protein {ECO:0000313|EMBL:EWC94177.1}; Flags: Fragment;; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein LOC679314
64_010_scaffold_284_13
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11583..12182)
DNA (600bp) protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:EWC95894.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
64_010_scaffold_284_14
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12319..13266
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN27_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC92960.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
64_010_scaffold_284_15
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13314..14249
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN79_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC92972.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
64_010_scaffold_284_16
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14300..15247
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3AM90_9ACTN
Putative lipoprotein {ECO:0000313|EMBL:EWC94395.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
64_010_scaffold_284_17
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15278..16303
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN27_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC92968.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
64_010_scaffold_284_18
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16449..17027
DNA (579bp) protein (193aa)
Isochorismatase family protein {ECO:0000313|EMBL:EWC92979.1}; EC=3.-.-.- {ECO:0000313|EMBL:EWC92979.1};; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
Isochorismatase hydrolase n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W877_ATOPD
isochorismatase hydrolase
64_010_scaffold_284_19
unknown

Not on your lists

17202..17306
DNA (105bp) protein (35aa)

This feature has no annotations

64_010_scaffold_284_20
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17683..18072)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W875_ATOPD
Uncharacterized protein {ECO:0000313|EMBL:EWC94338.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
64_010_scaffold_284_21
unknown

Not on your lists

comp(18011..18163)
DNA (153bp) protein (51aa)

This feature has no annotations

64_010_scaffold_284_22
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18322..19044
DNA (723bp) protein (241aa)
Transcriptional regulator, XRE family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W874_ATOPD
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EWC94342.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
XRE family transcriptional regulator
64_010_scaffold_284_23
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19288..20580
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Atopobium vaginae DSM 15829 RepID=F1T6M0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EWC91928.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
64_010_scaffold_284_24
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20785..21270
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3A5C7_9ACTN
Flavodoxin {ECO:0000313|EMBL:EWC94337.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
putative flavodoxin
64_010_scaffold_284_25
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21546..21788)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W869_ATOPD
PF11213 family protein {ECO:0000313|EMBL:EWC94336.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
64_010_scaffold_284_26
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21788..23149)
DNA (1362bp) protein (454aa)
Beta-lactamase domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W868_ATOPD
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EWC91927.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
beta-lactamase domain-containing protein
64_010_scaffold_284_27
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(23189..24049)
DNA (861bp) protein (287aa)
30S ribosomal protein S12 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W867_ATOPD
Esterase domain protein {ECO:0000313|EMBL:EWC91925.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
30S ribosomal protein S12
64_010_scaffold_284_28
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24051..26570)
DNA (2520bp) protein (840aa)
Sodium/hydrogen exchanger n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W866_ATOPD
Transporter, CPA2 family {ECO:0000313|EMBL:EWC94339.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
sodium/hydrogen exchanger
64_010_scaffold_284_29
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27524..28582
DNA (1059bp) protein (353aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W864_ATOPD
Alcohol dehydrogenase zinc-binding domain-containing protein
Putative alcohol dehydrogenase {ECO:0000313|EMBL:EWC94332.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
64_010_scaffold_284_30
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28695..29873
DNA (1179bp) protein (393aa)
Cobalamin synthesis protein P47K n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W863_ATOPD
CobW/P47K family protein {ECO:0000313|EMBL:EWC93763.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
cobalamin synthesis protein P47K
Displaying 30 items

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