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64_010_scaffold_543

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_543_1
unknown

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comp(3..497)
DNA (495bp) protein (165aa)

This feature has no annotations

64_010_scaffold_543_2
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(899..2764)
DNA (1866bp) protein (622aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glucosamine/fructose-6-phosphate aminotransferase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W952_ATOPD
64_010_scaffold_543_3
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3173..3682
DNA (510bp) protein (170aa)
Putative membrane protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNC6_EUBLK
Putative bacterial integral membrane protein {ECO:0000313|EMBL:EWC94380.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
hypothetical protein
64_010_scaffold_543_4
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3682..4416
DNA (735bp) protein (245aa)
ABC-type cobalt transport system, permease component CbiQ n=1 Tax=Clostridium saccharobutylicum DSM 13864 PF6_CLOSA">RepID=U5MPF6_CLOSA
Cobalt transport protein {ECO:0000313|EMBL:EWC94082.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
cbiQ1; ABC-type cobalt transport system, permease component CbiQ
64_010_scaffold_543_5
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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4424..5929
DNA (1506bp) protein (502aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24MQ9_DESHY
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC94355.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein
64_010_scaffold_543_6
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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5916..6890
DNA (975bp) protein (325aa)
Transcriptional regulator, AraC family n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XTE3_DESHA
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EWC94078.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
AraC family transcriptional regulator
64_010_scaffold_543_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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6994..8754
DNA (1761bp) protein (587aa)
ABC transporter n=1 Tax=Clostridium termitidis CT1112 RepID=S0FNL5_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC94080.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein; K06147 ATP-binding cassette, subfamily B, bacterial
64_010_scaffold_543_8
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8759..10510
DNA (1752bp) protein (584aa)
ABC transporter related n=3 Tax=Eggerthella RepID=C8WKL1_EGGLE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EWC94075.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial
64_010_scaffold_543_9
unknown

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comp(10503..10637)
DNA (135bp) protein (45aa)

This feature has no annotations

64_010_scaffold_543_10
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10932..12263
DNA (1332bp) protein (444aa)
Putative mercury(II) reductase n=1 Tax=Lactobacillus gasseri K7 RepID=S1RV35_9LACO
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EWC94359.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
putative mercury(II) reductase
64_010_scaffold_543_11
Lactobacillus fermentum, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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12549..12878
DNA (330bp) protein (110aa)
Putative transposase n=2 Tax=Lactobacillus fermentum RepID=B2GBJ3_LACF3
Putative transposase (Transposase)
Putative transposase {ECO:0000313|EMBL:BAG27025.1}; TaxID=334390 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus fermentum (strain NBRC 3956 / LMG 18251).;"
64_010_scaffold_543_12
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(13025..13141)
DNA (117bp) protein (39aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W951_ATOPD
Fic/DOC family protein {ECO:0000313|EMBL:EWC94379.1}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
filamentation induced by cAMP protein fic
Displaying 12 items

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