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64_010_scaffold_568

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_568_1
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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389..3481
DNA (3093bp) protein (1031aa)
Transcriptional regulator, SARP family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8C5_ATOPD
Transcriptional activator domain protein {ECO:0000313|EMBL:EWC92316.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
SARP family transcriptional regulator
64_010_scaffold_568_2
Atopobium sp. ICM42b, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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3573..6323
DNA (2751bp) protein (917aa)
Protein translocase subunit SecA n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8C4_ATOPD
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;"
preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA
64_010_scaffold_568_3
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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6326..7435
DNA (1110bp) protein (370aa)
Peptide chain release factor 2 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8C3_ATOPD
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
peptide chain release factor 2; K02836 peptide chain release factor 2
64_010_scaffold_568_4
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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7437..8318
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8C2_ATOPD
PF10035 family protein {ECO:0000313|EMBL:EWC92325.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
hypothetical protein
64_010_scaffold_568_5
unknown

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8452..8604
DNA (153bp) protein (51aa)

This feature has no annotations

64_010_scaffold_568_6
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(8958..9740)
DNA (783bp) protein (261aa)
Transcriptional regulator, DeoR family n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8C1_ATOPD
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EWC92354.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
DeoR family transcriptional regulator
64_010_scaffold_568_7
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10121..10576
DNA (456bp) protein (152aa)
putative PTS IIA-like nitrogen-regulatory protein PtsN; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8C0_ATOPD
Phosphoenolpyruvate-dependent sugar PTS family porter, EIIA 2 component {ECO:0000313|EMBL:EWC92278.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
64_010_scaffold_568_8
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10576..10875
DNA (300bp) protein (100aa)
PTS system lactose/cellobiose-specific transporter subunit IIB; K02822 PTS system, ascorbate-specific IIB component [EC:2.7.1.69]
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B9_ATOPD
PTS system, lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:EWC92336.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
64_010_scaffold_568_9
Atopobium sp. BS2, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11151..12344
DNA (1194bp) protein (398aa)
Putative sugar-specific permease SgaT/UlaA n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W8B8_ATOPD
PTS system sugar-specific permease component {ECO:0000313|EMBL:EWC92261.1}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;"
putative sugar-specific permease SgaT/UlaA; K03475 PTS system, ascorbate-specific IIC component
Displaying 9 items

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