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64_010_scaffold_331_12

Organism: 64_010_Atopobium_48_11

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(12088..12609)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAI1_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 152.0
  • Bit_score: 276
  • Evalue 2.10e-71
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=936550 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. BS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 173.0
  • Bit_score: 329
  • Evalue 3.80e-87
16S rRNA-processing protein; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 152.0
  • Bit_score: 276
  • Evalue 6.60e-72

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Taxonomy

Atopobium sp. BS2 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 522
TTGCGTAAACACTGGCGAGCAATTGCTCAAATTGTTAAAACGCATGGTAAAAGAGGGGAGGTTGTGACGGTTCCCGTTCACAGCCTTCCTTCTCTTATAGCTGAAGGCATGACAGTTGTTCCTGTTCCGCCTGCACTTAAAGGCCCAAGGCAGTTCTCAGTTGTCTCTGTTGAGTCAGATGACAGAGAAGGTAGTCTTGTAACTTTTGAAGACGTAACTACCATCTCAGACGCTGAAGAGCTTGTGGGTAAAACGCTTCTGGTAGAAGAAGATTGTCTTCCAGAAAACTTTGGTCTGGTCAATGTTTCTCTGCTTGTGGGTAGAGAAGTACTTGATATAGAACATGGTTCTCTGGGTGAAATTTCAGAGGTTCTTATTGGACCCACACAAAATGTGTGGGTACTTGAGGGACCTTTTGGCCAGGTAATGATGCCTGCTGTTGATGAATTTATCAAAGAGGCTCCAGCTGAGGGTCCCATTACCGTCTCAATTCCTCAGGGTCTTCTTAGGTTAGGTGAGTAG
PROTEIN sequence
Length: 174
LRKHWRAIAQIVKTHGKRGEVVTVPVHSLPSLIAEGMTVVPVPPALKGPRQFSVVSVESDDREGSLVTFEDVTTISDAEELVGKTLLVEEDCLPENFGLVNVSLLVGREVLDIEHGSLGEISEVLIGPTQNVWVLEGPFGQVMMPAVDEFIKEAPAEGPITVSIPQGLLRLGE*