ggKbase home page

64_010_scaffold_331_13

Organism: 64_010_Atopobium_48_11

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(12612..12914)

Top 3 Functional Annotations

Value Algorithm Source
UPF0109 protein Apar_0689 n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8WAI0_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 100.0
  • Bit_score: 194
  • Evalue 6.00e-47
UPF0109 protein HMPREF1493_0324 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 195
  • Evalue 2.90e-47
RNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 100.0
  • Bit_score: 194
  • Evalue 1.90e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 303
GTGTCTGAATTCACAGAGCCCACTGAGGTAGACGCTGTCGATCAAGACATTCAGGAGATGCCTTCTGACAAGGTTGCTGACCTTGTTGAGTACATCGTTTGTGGTCTTGTCGATAATGAAGATGCTGTTGCACTCGACGTCACCGATCGCGAGGATGGAGCCTTGATTGAGGTTTCTTGCTCTGAGGAAGACGCTGGACGTGTCATCGGCCGCAAGGGTAGAACCATTAAGGCTATTCGTACTTTGGCTCGTGCTCTTGGCCAGCGTGTTGGCACCTCTGTTGATGTCGAGGTTGTAGGCTAA
PROTEIN sequence
Length: 101
VSEFTEPTEVDAVDQDIQEMPSDKVADLVEYIVCGLVDNEDAVALDVTDREDGALIEVSCSEEDAGRVIGRKGRTIKAIRTLARALGQRVGTSVDVEVVG*