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64_010_scaffold_420

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_420_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2..964
DNA (963bp) protein (321aa)
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
3-isopropylmalate dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B3D44F
Uncharacterized protein {ECO:0000313|EMBL:ETI83819.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_420_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1064..2227
DNA (1164bp) protein (388aa)
ilvE; branched-subunit-amino-acid transaminase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
branched-chain amino acid aminotransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4B873
Uncharacterized protein {ECO:0000313|EMBL:ETI83818.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_420_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2336..4207
DNA (1872bp) protein (624aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
dihydroxy-acid dehydratase n=1 Tax=Varibaculum cambriense RepID=UPI0003B311DD
64_010_scaffold_420_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4353..4847)
DNA (495bp) protein (165aa)
sodium:solute symporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B75DE8
Uncharacterized protein {ECO:0000313|EMBL:ETI83816.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
64_010_scaffold_420_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4844..6439)
DNA (1596bp) protein (532aa)
xylulokinase; K00854 xylulokinase [EC:2.7.1.17]
sugar (pentulose and hexulose) kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B5D28C
Uncharacterized protein {ECO:0000313|EMBL:ETI83815.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_420_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6439..7077)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B5F0CF
AcrR family transcriptional regulator {ECO:0000313|EMBL:ETI83814.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
AcrR family transcriptional regulator
64_010_scaffold_420_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7338..8795
DNA (1458bp) protein (486aa)
hemL2; glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
glutamate-1-semialdehyde aminotransferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B451E2
Uncharacterized protein {ECO:0000313|EMBL:ETI83811.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_420_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8792..9838
DNA (1047bp) protein (349aa)
aldolase n=1 Tax=Varibaculum cambriense RepID=UPI0003B6EA00
Class II aldolase/adducin family protein {ECO:0000313|EMBL:ETI83810.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
class II aldolase/adducin family protein
64_010_scaffold_420_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9898..11307
DNA (1410bp) protein (470aa)
aldehyde dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B524DE
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
alkH; NAD-dependent aldehyde dehydrogenase AlkH
64_010_scaffold_420_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11396..11881)
DNA (486bp) protein (162aa)
hypothetical protein; K01673 carbonic anhydrase [EC:4.2.1.1]
carbonate dehydratase n=1 Tax=Varibaculum cambriense RepID=UPI0003B36FE7
Uncharacterized protein {ECO:0000313|EMBL:ETI83808.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_420_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11905..12720)
DNA (816bp) protein (272aa)
UPI0003D5A0DF related cluster n=1 Tax=unknown RepID=UPI0003D5A0DF
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ETI83807.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
transposase IS6110
64_010_scaffold_420_trna_1
unknown

Not on your lists

12032..12104
DNA (73bp)
transferRNA Ala
64_010_scaffold_420_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12766..12957
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B44C74
Uncharacterized protein {ECO:0000313|EMBL:ETI83806.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_420_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13523..14203
DNA (681bp) protein (227aa)
GNAT family acetyltraansferase n=1 Tax=Varibaculum cambriense RepID=UPI0003B3D793
Uncharacterized protein {ECO:0000313|EMBL:ETI83804.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
64_010_scaffold_420_14
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

14273..15205
DNA (933bp) protein (311aa)
restriction endonuclease n=1 Tax=Varibaculum cambriense RepID=UPI0003B45BD0
EcoKMrr {ECO:0000313|EMBL:CRH60370.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
mrr restriction system protein
64_010_scaffold_420_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15391..15873
DNA (483bp) protein (161aa)
PTS glucose transporter subunit IIA n=1 Tax=Varibaculum cambriense RepID=UPI0003B4D412
Phosphotransferase system enzyme IIA component {ECO:0000313|EMBL:ETI83803.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
phosphotransferase system enzyme IIA component
64_010_scaffold_420_16
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16036..17649
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B75104
Repeat protein {ECO:0000313|EMBL:EPI55719.1}; Flags: Fragment;; TaxID=1261059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis JCP7659.;"
phage prohead protease, HK97 family
Displaying 17 items

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