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64_010_scaffold_596

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_596_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..894
DNA (894bp) protein (298aa)
Valine--tRNA ligase {ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|SAAS:SAAS00105779};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
valS; valine--tRNA ligase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9]
valyl-tRNA synthetase n=1 Tax=Varibaculum cambriense RepID=UPI0003B429C3
64_010_scaffold_596_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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941..2827
DNA (1887bp) protein (629aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-binding enzyme n=1 Tax=Varibaculum cambriense RepID=UPI0003B67CB1
Uncharacterized protein {ECO:0000313|EMBL:ETI83104.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_596_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2880..3200)
DNA (321bp) protein (107aa)
chorismate mutase; K04092 chorismate mutase [EC:5.4.99.5]
chorismate mutase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4536C
Chorismate mutase {ECO:0000313|EMBL:ETI83103.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_596_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3335..4576)
DNA (1242bp) protein (414aa)
ATP-dependent protease n=1 Tax=Varibaculum cambriense RepID=UPI0003B554C4
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ATP-dependent protease ATP-binding subunit; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX
64_010_scaffold_596_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4662..5327)
DNA (666bp) protein (222aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
endopeptidase Clp (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Varibaculum cambriense RepID=UPI0003B67234
64_010_scaffold_596_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5333..5950)
DNA (618bp) protein (206aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
endopeptidase Clp (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease ClpP n=1 Tax=Varibaculum cambriense RepID=UPI0003B51848
64_010_scaffold_596_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6207..7541)
DNA (1335bp) protein (445aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
trigger factor n=1 Tax=Varibaculum cambriense RepID=UPI0003B31D0C
trigger factor; K03545 trigger factor
64_010_scaffold_596_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7747..9066)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B44536
Uncharacterized protein {ECO:0000313|EMBL:ETI83098.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
putative lipoprotein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein)
64_010_scaffold_596_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9113..9361)
DNA (249bp) protein (83aa)
preprotein translocase subunit SecG n=1 Tax=Varibaculum cambriense RepID=UPI0003B32E81
Preprotein translocase subunit SecG {ECO:0000313|EMBL:ETI83097.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
64_010_scaffold_596_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9491..10264)
DNA (774bp) protein (258aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
tpiA; triose-phosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
triosephosphate isomerase n=1 Tax=Varibaculum cambriense RepID=UPI0003B5CB30
64_010_scaffold_596_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10269..11465)
DNA (1197bp) protein (399aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
phosphoglycerate kinase n=1 Tax=Varibaculum cambriense RepID=UPI0003B4222F
64_010_scaffold_596_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11574..11648)
DNA (75bp) protein (25aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Varibaculum cambriense RepID=UPI0003B531B0
Displaying 12 items

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