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64_010_scaffold_662

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
64_010_scaffold_662_1
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..633)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZEB9_BIFBR
IS30 family transposase {ECO:0000313|EMBL:KFI52317.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
Fis family transcriptional regulator
64_010_scaffold_662_2
Corynebacterium diphtheriae, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(673..1059)
DNA (387bp) protein (129aa)
Putative transposase for insertion element n=2 Tax=Corynebacterium diphtheriae RepID=H2GUS3_CORD7
putative transposase for insertion element
Putative transposase for insertion element {ECO:0000313|EMBL:CKG65234.1}; TaxID=1717 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium diphtheriae.;"
64_010_scaffold_662_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1491..2681)
DNA (1191bp) protein (397aa)
translation elongation factor Tu (EC:2.7.7.4); K02358 elongation factor Tu
elongation factor Tu n=1 Tax=Varibaculum cambriense RepID=UPI0003B4CAF8
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_662_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2810..4972)
DNA (2163bp) protein (721aa)
elongation factor G n=1 Tax=Varibaculum cambriense RepID=UPI0003B3CF78
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fusA; elongation factor EF2; K02355 elongation factor G
64_010_scaffold_662_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4994..5464)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Varibaculum cambriense RepID=UPI0003B74332
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
64_010_scaffold_662_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5466..5840)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Varibaculum cambriense RepID=UPI0003B5810D
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
64_010_scaffold_662_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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6211..7644
DNA (1434bp) protein (478aa)
isochorismate synthase; K02552 menaquinone-specific isochorismate synthase [EC:5.4.4.2]
isochorismate synthase n=1 Tax=Varibaculum cambriense RepID=UPI0003B673ED
Isochorismate synthase {ECO:0000313|EMBL:ETI83776.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
64_010_scaffold_662_8

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8002..8235
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B2FEAC
Uncharacterized protein {ECO:0000313|EMBL:ETJ37929.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
64_010_scaffold_662_9
unknown

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8608..8955
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B2FEAC
64_010_scaffold_662_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9144..10130)
DNA (987bp) protein (329aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (EC:2.2.1.9)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B4095C
Displaying 10 items

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