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65_006_scaffold_1

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Displaying items 1-30 of 325 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_1_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(294..773)
DNA (480bp) protein (160aa)
Uncharacterized protein n=70 Tax=Pseudomonas RepID=T2E1A5_PSEAI
hypothetical protein
Alginate regulatory protein AlgP {ECO:0000313|EMBL:ETD54396.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
65_006_scaffold_1_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

819..2735
DNA (1917bp) protein (639aa)
ATP-binding component of ABC transporter n=4 Tax=Pseudomonas aeruginosa RepID=K1C5Q9_PSEAI
ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3
Glutathione ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETD54395.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
65_006_scaffold_1_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2735..3313
DNA (579bp) protein (193aa)
Uncharacterized protein n=44 Tax=Pseudomonas RepID=G4LJR1_PSEAI
hypothetical protein
Membrane protein {ECO:0000313|EMBL:EQL44264.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;"
65_006_scaffold_1_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3320..4078
DNA (759bp) protein (253aa)
Membrane protein n=41 Tax=Pseudomonas aeruginosa RepID=V5T4S0_PSEAI
putative integral membrane transport protein
UPF0053 protein {ECO:0000313|EMBL:CDH80337.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
65_006_scaffold_1_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4308..4937
DNA (630bp) protein (210aa)
LysE family efflux protein n=122 Tax=Pseudomonas RepID=G4LJQ9_PSEAI
LysE family efflux protein
Homoserine/homoserine lactone efflux protein {ECO:0000313|EMBL:BAR70731.1}; LysE family efflux protein {ECO:0000313|EMBL:BAQ43159.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI80181.1}; Threonine transporter RhtB {ECO:0000313|EMBL:AKE72929.1}; Uncharacterized protein {ECO:0000313|EMBL:CEI13804.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
65_006_scaffold_1_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4985..6943
DNA (1959bp) protein (653aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=S0HR47_PSEAI
Cystathionine gamma-synthase {ECO:0000313|EMBL:AHB58996.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
hypothetical protein; K07243 high-affinity iron transporter
65_006_scaffold_1_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7010..7492
DNA (483bp) protein (161aa)
UPF0178 protein PA14_69280 n=31 Tax=Pseudomonas RepID=Y6928_PSEAB
hypothetical protein
UPF0178 protein M770_28335 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;"
65_006_scaffold_1_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7477..7950)
DNA (474bp) protein (158aa)
Uncharacterized protein n=49 Tax=Pseudomonas RepID=G4LJQ6_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERV75639.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
65_006_scaffold_1_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8046..8714)
DNA (669bp) protein (223aa)
Isoprenoid biosynthesis protein with amidotransferase-like domain n=92 Tax=Pseudomonas RepID=G2L352_PSEAI
isoprenoid biosynthesis protein
Enhancing lycopene biosynthesis protein 2 {ECO:0000313|EMBL:CEI13793.1}; Isoprenoid biosynthesis protein {ECO:0000313|EMBL:AKE72926.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI80177.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
65_006_scaffold_1_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8879..9469)
DNA (591bp) protein (197aa)
Uncharacterized protein n=132 Tax=Pseudomonas RepID=G4LIT7_PSEAI
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AHB58992.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
65_006_scaffold_1_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9713..10726
DNA (1014bp) protein (338aa)
hemB; delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24]
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
Delta-aminolevulinic acid dehydratase n=108 Tax=Pseudomonas RepID=HEM2_PSEAE
65_006_scaffold_1_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10744..12954
DNA (2211bp) protein (737aa)
ppk; polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase {ECO:0000313|EMBL:BAQ43152.1}; EC=2.7.4.1 {ECO:0000313|EMBL:BAQ43152.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Polyphosphate kinase n=5 Tax=Pseudomonas aeruginosa RepID=Q02EC2_PSEAB
65_006_scaffold_1_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12941..14446)
DNA (1506bp) protein (502aa)
Exopolyphosphatase n=59 Tax=Pseudomonas RepID=E3A1M0_PSEAI
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:ERV75634.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
65_006_scaffold_1_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14645..14971
DNA (327bp) protein (109aa)
Thioredoxin n=132 Tax=Pseudomonas RepID=THIO_PSEAE
trxA; thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
65_006_scaffold_1_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15216..16475
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
Transcription termination factor Rho n=134 Tax=Pseudomonas RepID=RHO_PSEAE
rho; transcription termination factor; K03628 transcription termination factor Rho
65_006_scaffold_1_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16546..18534
DNA (1989bp) protein (663aa)
O-antigen acetylase n=7 Tax=Pseudomonas aeruginosa RepID=K1C7S2_PSEAI
O-antigen acetylase
Acyltransferase {ECO:0000313|EMBL:ETD54381.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
65_006_scaffold_1_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18613..20079
DNA (1467bp) protein (489aa)
putative 3-octaprenyl-4-hydroxybenzoate carboxylyase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-]
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01636}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=105 Tax=Pseudomonas RepID=UBID_PSEA8
65_006_scaffold_1_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20079..21047
DNA (969bp) protein (323aa)
ubiB; CDP-6-deoxy-delta-3,4-glucoseen reductase; K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1]
CDP-6-deoxy-delta-3,4-glucoseen reductase n=117 Tax=Pseudomonas RepID=G4LIS8_PSEAI
CDP-6-deoxy-delta-3,4-glucoseen reductase {ECO:0000313|EMBL:EZO97600.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_1_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21084..22430)
DNA (1347bp) protein (449aa)
sn-glycerol-3-phosphate transporter n=113 Tax=Pseudomonas RepID=V5T4Q7_PSEAI
glpT; sn-glycerol-3-phosphate transporter
sn-glycerol-3-phosphate transporter {ECO:0000313|EMBL:AHW73983.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
65_006_scaffold_1_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22680..23657)
DNA (978bp) protein (326aa)
Oxidoreductase n=44 Tax=Pseudomonas aeruginosa RepID=K1C9K3_PSEAI
putative oxidoreductase
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:AKE72917.1}; Putative oxidoreductase {ECO:0000313|EMBL:BAQ43143.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
65_006_scaffold_1_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23812..24231
DNA (420bp) protein (140aa)
Flagellar basal body-associated protein FliL-like protein n=126 Tax=Pseudomonas RepID=G2L340_PSEAI
flagellar basal body-associated protein FliL-like protein
Flagellar basal body protein FliL {ECO:0000313|EMBL:AKE72916.1}; Flagellar basal body-associated protein FliL-like protein {ECO:0000313|EMBL:CKI25716.1}; Flagellar biosynthesis protein FliL {ECO:0000313|EMBL:BAR70714.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
65_006_scaffold_1_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24438..25511
DNA (1074bp) protein (358aa)
Uncharacterized protein n=50 Tax=Pseudomonas aeruginosa RepID=G4LIS4_PSEAI
yhiI; hypothetical protein; K01993 HlyD family secretion protein
HlyD family secretion protein {ECO:0000313|EMBL:BAR70713.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI80163.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ43141.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
65_006_scaffold_1_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25508..28258
DNA (2751bp) protein (917aa)
ATP-binding/permease fusion ABC transporter n=6 Tax=Pseudomonas aeruginosa RepID=K1C6G7_PSEAI
yhiH; ABC transporter ATP-binding protein/permease; K13926 ribosome-dependent ATPase
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHB58979.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
65_006_scaffold_1_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28262..29386
DNA (1125bp) protein (375aa)
ABC transporter permease n=36 Tax=Pseudomonas RepID=M9SFU4_PSEAI
yhhJ; ABC transporter permease; K09686 antibiotic transport system permease protein
ABC transporter permease {ECO:0000313|EMBL:EZO97594.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_1_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29396..29854)
DNA (459bp) protein (153aa)
Uncharacterized protein n=36 Tax=Pseudomonas RepID=G4LIS1_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH80317.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
65_006_scaffold_1_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30039..30170
DNA (132bp) protein (44aa)
Uncharacterized protein n=120 Tax=Pseudomonas RepID=G4LIS0_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZO97592.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_1_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30221..30832)
DNA (612bp) protein (204aa)
5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1C7R2_PSEAI
65_006_scaffold_1_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31054..31368)
DNA (315bp) protein (105aa)
Cell division protein ZapA n=132 Tax=Pseudomonas RepID=ZAPA_PSEAE
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_1_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31365..31574)
DNA (210bp) protein (70aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=J6Z1H8_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH80313.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
65_006_scaffold_1_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31820..32317
DNA (498bp) protein (166aa)
UPF0149 protein PLES_56191 n=131 Tax=Pseudomonas RepID=Y5619_PSEA8
hypothetical protein
UPF0149 protein X778_09130 {ECO:0000256|HAMAP-Rule:MF_00346}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
Displaying items 1-30 of 325 in total

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