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65_006_scaffold_59

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Displaying items 1-30 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_59_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..622
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 19660 RepID=U9ALL5_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP04810.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_59_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

633..1085
DNA (453bp) protein (151aa)
Uncharacterized protein n=6 Tax=Pseudomonas aeruginosa RepID=K1CYC1_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZP04811.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_59_3
unknown

Not on your lists

1697..1861
DNA (165bp) protein (55aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=S0IIB7_PSEAI
65_006_scaffold_59_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2417..2755)
DNA (339bp) protein (113aa)
Uncharacterized protein n=22 Tax=Pseudomonas RepID=Q9HYN4_PSEAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EVT84641.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA09.;"
65_006_scaffold_59_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..4062
DNA (1041bp) protein (347aa)
Aliphatic amidase {ECO:0000255|HAMAP-Rule:MF_01242}; EC=3.5.1.4 {ECO:0000255|HAMAP-Rule:MF_01242};; Acylamide amidohydrolase {ECO:0000255|HAMAP-Rule:MF_01242}; TaxID=557722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain LESB58).;"
Aliphatic amidase n=105 Tax=Pseudomonas RepID=AMIE_PSEA8
amiE; acylamide amidohydrolase
65_006_scaffold_59_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4146..5261
DNA (1116bp) protein (372aa)
ATPase AAA n=34 Tax=Pseudomonas RepID=V5STR4_PSEAI
amiB; putative chaperone
ATP-dependent protease ATP-binding subunit-like protein AmiB {ECO:0000313|EMBL:CDH76048.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
65_006_scaffold_59_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5287..6444
DNA (1158bp) protein (386aa)
Aliphatic amidase expression-regulating protein n=32 Tax=Pseudomonas RepID=AMIC_PSEAE
amiC; aliphatic amidase expression-regulating protein; K01999 branched-chain amino acid transport system substrate-binding protein
Aliphatic amidase expression-regulating protein; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
65_006_scaffold_59_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6441..7031
DNA (591bp) protein (197aa)
Aliphatic amidase regulator n=5 Tax=Pseudomonas aeruginosa RepID=Q02QJ7_PSEAB
amiR; aliphatic amidase regulator
Aliphatic amidase regulator {ECO:0000313|EMBL:CDH76050.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
65_006_scaffold_59_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7553..8227
DNA (675bp) protein (225aa)
Uncharacterized protein n=31 Tax=Pseudomonas RepID=G4LQZ6_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ38529.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
65_006_scaffold_59_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8274..8621)
DNA (348bp) protein (116aa)
Fucose-binding lectin PA-IIL n=6 Tax=Pseudomonas aeruginosa RepID=Q02QJ5_PSEAB
lecB; fucose-binding lectin PA-IIL
Fucose-binding lectin PA-IIL {ECO:0000313|EMBL:ERV81877.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
65_006_scaffold_59_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9088..10146
DNA (1059bp) protein (353aa)
Secretion protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CMZ5_PSEAI
HlyD family secretion protein
HlyD family secretion protein {ECO:0000313|EMBL:EZP04819.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_59_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10151..11179
DNA (1029bp) protein (343aa)
Uncharacterized protein n=46 Tax=Pseudomonas RepID=G4LQZ3_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH76054.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
65_006_scaffold_59_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11184..12062)
DNA (879bp) protein (293aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=K1CYC8_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG06746.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
65_006_scaffold_59_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12119..13465)
DNA (1347bp) protein (449aa)
dsdA; D-serine dehydratase (EC:4.3.1.18); K01753 D-serine dehydratase [EC:4.3.1.18]
Probable D-serine dehydratase {ECO:0000255|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000255|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000255|HAMAP-Rule:MF_01030}; Short=DSD {ECO:0000255|HAMAP-Rule:MF_01030};; TaxID=208963 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain UCBPP-PA14).;"
Probable D-serine dehydratase n=5 Tax=Pseudomonas aeruginosa RepID=SDHD_PSEAB
65_006_scaffold_59_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13689..15032
DNA (1344bp) protein (448aa)
Glutamine synthetase n=11 Tax=Pseudomonas aeruginosa RepID=S0IJS7_PSEAI
glutamate--ammonia ligase
Glutamate--ammonia ligase {ECO:0000313|EMBL:ETD44936.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
65_006_scaffold_59_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15216..16520
DNA (1305bp) protein (435aa)
MFS transporter n=37 Tax=Pseudomonas aeruginosa RepID=V5STS5_PSEAI
MFS transporter
MFS transporter {ECO:0000313|EMBL:EQL39618.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;"
65_006_scaffold_59_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16562..17173
DNA (612bp) protein (204aa)
Uncharacterized protein n=11 Tax=Pseudomonas RepID=K1CQY2_PSEAI
hypothetical protein; K09931 hypothetical protein
Transferase 1, rSAM/selenodomain-associated {ECO:0000313|EMBL:EZP04825.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_59_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17177..17926)
DNA (750bp) protein (250aa)
Flagellar brake protein YcgR n=90 Tax=Pseudomonas RepID=T2E421_PSEAI
Glycosyltransferase {ECO:0000313|EMBL:EZP04826.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
glycosyltransferase
65_006_scaffold_59_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17997..18467)
DNA (471bp) protein (157aa)
Uncharacterized protein n=113 Tax=Pseudomonas RepID=G4LQY6_PSEAI
flgN; hypothetical protein; K02399 flagella synthesis protein FlgN
Uncharacterized protein {ECO:0000313|EMBL:EZP04827.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_59_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18522..18845)
DNA (324bp) protein (108aa)
Uncharacterized protein n=19 Tax=Pseudomonas RepID=G4LQY5_PSEAI
flgM; hypothetical protein; K02398 negative regulator of flagellin synthesis FlgM
Uncharacterized protein {ECO:0000313|EMBL:CDH76062.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
65_006_scaffold_59_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18990..19727)
DNA (738bp) protein (246aa)
Uncharacterized protein n=19 Tax=Pseudomonas aeruginosa RepID=V6ABD9_PSEAI
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
flgA; flagellar basal body P-ring biosynthesis protein; K02386 flagella basal body P-ring formation protein FlgA
65_006_scaffold_59_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19820..20752
DNA (933bp) protein (311aa)
Chemotaxis protein CheW n=35 Tax=Pseudomonas aeruginosa RepID=R9ZGM8_PSEAI
putative chemotaxis protein; K03415 two-component system, chemotaxis family, response regulator CheV
Chemotaxis protein {ECO:0000313|EMBL:CDH76064.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
65_006_scaffold_59_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20829..21653
DNA (825bp) protein (275aa)
putative chemotaxis protein methyltransferase; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA09.;"
Chemotaxis protein methyltransferase 1 n=121 Tax=Pseudomonas RepID=CHER1_PSEAE
65_006_scaffold_59_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21968..22273
DNA (306bp) protein (102aa)
Uncharacterized protein n=129 Tax=Pseudomonas RepID=G4LQY1_PSEAI
hypothetical protein
Anti-anti-sigma regulatory factor {ECO:0000313|EMBL:ETD44927.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
65_006_scaffold_59_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22275..23990
DNA (1716bp) protein (572aa)
Two-component response regulator n=99 Tax=Pseudomonas RepID=M9RYC5_PSEAI
chemotaxis protein CheY
Two-component system response regulator {ECO:0000313|EMBL:ERV81892.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
65_006_scaffold_59_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24056..24406
DNA (351bp) protein (117aa)
Histidine phosphotransfer domain-containing protein n=108 Tax=Pseudomonas RepID=G4LQX9_PSEAI
histidine-containing phosphotransfer (HPt) domain protein
Sensor histidine kinase {ECO:0000313|EMBL:EVT84969.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA09.;"
65_006_scaffold_59_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24490..26628
DNA (2139bp) protein (713aa)
ATP-dependent DNA helicase RecQ n=115 Tax=Pseudomonas RepID=B7V4P8_PSEA8
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EZP04835.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
65_006_scaffold_59_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26723..27886
DNA (1164bp) protein (388aa)
Diguanylate cyclase domain protein n=79 Tax=Pseudomonas RepID=T2DYF9_PSEAI
Two-component system response regulator {ECO:0000313|EMBL:ERV81895.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
putative two-component response regulator
65_006_scaffold_59_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28037..29053
DNA (1017bp) protein (339aa)
Uncharacterized protein n=27 Tax=Pseudomonas aeruginosa RepID=M9S337_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD44922.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
65_006_scaffold_59_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29171..29605
DNA (435bp) protein (145aa)
MarR family transcriptional regulator n=124 Tax=Bacteria RepID=G4LQX5_PSEAI
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:ERV81897.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
Displaying items 1-30 of 79 in total

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