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65_006_scaffold_30

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Displaying items 1-30 of 117 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_30_1
unknown

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comp(168..611)
DNA (444bp) protein (148aa)

This feature has no annotations

65_006_scaffold_30_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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768..1697
DNA (930bp) protein (310aa)
metA; homoserine O-succinyltransferase; K00651 homoserine O-succinyltransferase [EC:2.3.1.46]
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
Homoserine O-succinyltransferase n=305 Tax=Escherichia coli RepID=META_ECO57
65_006_scaffold_30_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1966..3567
DNA (1602bp) protein (534aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
aceB; malate synthase (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
Malate synthase n=3 Tax=Escherichia coli RepID=F7N405_ECOLX
65_006_scaffold_30_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3597..4901
DNA (1305bp) protein (435aa)
isocitrate lyase; K01637 isocitrate lyase [EC:4.1.3.1]
Isocitrate lyase n=972 Tax=Enterobacteriaceae RepID=ACEA_ECOL6
Isocitrate lyase {ECO:0000313|EMBL:EYV59895.1}; TaxID=1446502 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H11 str. 2010C-3214.;"
65_006_scaffold_30_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4950..6686
DNA (1737bp) protein (579aa)
aceK; isocitrate dehydrogenase kinase/phosphatase (EC:2.7.11.5); K00906 isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256|HAMAP-Rule:MF_00747};; EC=2.7.11.5 {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063055};; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063053};; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
Isocitrate dehydrogenase kinase/phosphatase n=7 Tax=Escherichia coli RepID=D3GSZ0_ECO44
65_006_scaffold_30_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6655..8841)
DNA (2187bp) protein (729aa)
ankyrin n=1 Tax=Escherichia coli RepID=UPI0002BB7D6C
Ankyrin repeat protein {ECO:0000313|EMBL:EQO53779.1}; TaxID=1280991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 41 (4-2677849).;"
arpA; putative type III effector protein (ankyrin repeat protein A)
65_006_scaffold_30_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9158..9982)
DNA (825bp) protein (275aa)
Repressor of aceBA operon n=31 Tax=Escherichia coli RepID=C3SC01_ECOLX
iclR; DNA-binding transcriptional repressor IclR; K13641 IclR family transcriptional regulator, acetate operon repressor
Acetate operon repressor {ECO:0000313|EMBL:EGU98842.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
65_006_scaffold_30_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10188..13871
DNA (3684bp) protein (1228aa)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EFJ85418.1}; EC=2.1.1.13 {ECO:0000313|EMBL:EFJ85418.1};; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
metH; homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase, repressor of metE and metF n=93 Tax=Escherichia coli RepID=J7RBP6_ECOLX
65_006_scaffold_30_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14091..15722
DNA (1632bp) protein (544aa)
Uncharacterized protein YjbB n=611 Tax=Enterobacteriaceae RepID=YJBB_ECOLI
Sodium-dependent inorganic phosphate (Pi) transporter family protein {ECO:0000313|EMBL:EMW91148.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
yjbB; transporter
65_006_scaffold_30_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15813..16502)
DNA (690bp) protein (230aa)
dipeptidase E (EC:3.4.13.21); K05995 dipeptidase E [EC:3.4.13.21]
Peptidase E {ECO:0000256|HAMAP-Rule:MF_00510, ECO:0000256|SAAS:SAAS00013387}; EC=3.4.13.21 {ECO:0000256|HAMAP-Rule:MF_00510, ECO:0000256|SAAS:SAAS00013385};; Alpha-aspartyl dipeptidase {ECO:0000256|HAMAP-Rule:MF_00510, ECO:0000256|SAAS:SAAS00085848}; Asp-specific dipeptidase {ECO:0000256|HAMAP-Rule:MF_00510}; Dipeptidase E {ECO:0000256|HAMAP-Rule:MF_00510}; Peptidase E; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
Peptidase E n=1089 Tax=Enterobacteriaceae RepID=PEPE_ECO24
65_006_scaffold_30_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16883..18112)
DNA (1230bp) protein (410aa)
L-sorbose 1-phosphate reductase (EC:1.1.1.14)
UPI0003D6386A related cluster n=1 Tax=unknown RepID=UPI0003D6386A
L-sorbose-1-P-reductase {ECO:0000313|EMBL:ETJ22058.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_30_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18164..18988)
DNA (825bp) protein (275aa)
Sorbose permease IID component (PTS system sorbose-specific EIIDcomponent) (EIID-Sor) n=1 Tax=Escherichia coli TA280 RepID=F4V906_ECOLX
sorbose permease IID component; K02815 PTS system, sorbose-specific IID component
Sorbose permease IID component (PTS system sorbose-specific EIIDcomponent) (EIID-Sor) {ECO:0000313|EMBL:EGI48177.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
65_006_scaffold_30_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18999..19796)
DNA (798bp) protein (266aa)
Sorbose permease IIC component (PTS system) n=90 Tax=Escherichia coli RepID=B7NFW0_ECOLU
sorbose permease IIC component (PTS system); K02814 PTS system, sorbose-specific IIC component
PTS system mannose-specific EIIC component {ECO:0000313|EMBL:EQX82446.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
65_006_scaffold_30_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20008..20355)
DNA (348bp) protein (116aa)
PTS system mannose/fructose/sorbose family transporter subunit IIB (EC:2.7.1.69); K02813 PTS system, sorbose-specific IIB component [EC:2.7.1.69]
UPI0003D6842D related cluster n=1 Tax=unknown RepID=UPI0003D6842D
Sorbose PTS component {ECO:0000313|EMBL:ETJ11807.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_30_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20355..20762)
DNA (408bp) protein (136aa)
sorbose-permease PTS system IIA component; K02812 PTS system, sorbose-specific IIA component [EC:2.7.1.69]
UPI0003D60DDE related cluster n=1 Tax=unknown RepID=UPI0003D60DDE
Sorbose PTS component Sorbose-permease PTS system IIA component {ECO:0000313|EMBL:ETJ11808.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_30_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20772..21578)
DNA (807bp) protein (269aa)
Predicted sorbitol-6-phosphate 2-dehydrogenase n=61 Tax=Escherichia RepID=B7UPI1_ECO27
D-glucitol-6-phosphate dehydrogenase
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EHU21754.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
65_006_scaffold_30_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21648..22595)
DNA (948bp) protein (316aa)
UPI0003D67367 related cluster n=1 Tax=unknown RepID=UPI0003D67367
sorC; sorbitol operon regulator
Transcriptional regulator protein of sorbose uptake and utilization {ECO:0000313|EMBL:ETJ11810.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_30_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22943..23815
DNA (873bp) protein (291aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
rluF; 23S rRNA pseudouridine synthase F; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Pseudouridine synthase n=27 Tax=Escherichia coli RepID=D6J508_ECOLX
65_006_scaffold_30_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23816..24088)
DNA (273bp) protein (91aa)
Uncharacterized protein n=103 Tax=Escherichia coli RepID=B7NFW6_ECOLU
yjbD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELE37377.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
65_006_scaffold_30_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24341..25690)
DNA (1350bp) protein (450aa)
aspartate kinase III (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4]
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
Aspartokinase n=460 Tax=Escherichia RepID=E2QJ54_ECOLX
65_006_scaffold_30_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26215..27864
DNA (1650bp) protein (550aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
pgi; glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=3 Tax=Escherichia coli RepID=L3YQC8_ECOLX
65_006_scaffold_30_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28219..28461
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Escherichia coli O44:H18 (strain 042 / EAEC) RepID=D3GT07_ECO44
hypothetical protein
Exopolysaccharide production protein YjbE {ECO:0000313|EMBL:EII23665.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
65_006_scaffold_30_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28575..29213
DNA (639bp) protein (213aa)
UPI0003D5D3A8 related cluster n=1 Tax=unknown RepID=UPI0003D5D3A8
Uncharacterized protein {ECO:0000313|EMBL:ETJ27573.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hypothetical protein
65_006_scaffold_30_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29210..29947
DNA (738bp) protein (246aa)
Uncharacterized protein YjbG n=85 Tax=Escherichia RepID=YJBG_ECOLI
yjbG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY10161.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
65_006_scaffold_30_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29947..32043
DNA (2097bp) protein (699aa)
UPI0003D5B0B0 related cluster n=1 Tax=unknown RepID=UPI0003D5B0B0
Uncharacterized protein {ECO:0000313|EMBL:ETJ27825.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
yjbH; putative porin
65_006_scaffold_30_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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32582..32992
DNA (411bp) protein (137aa)
Protein PsiE n=1003 Tax=Enterobacteriaceae RepID=PSIE_ECO24
phosphate-starvation-inducible protein PsiE
Protein PsiE {ECO:0000256|HAMAP-Rule:MF_01048}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
65_006_scaffold_30_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33086..33976)
DNA (891bp) protein (297aa)
Maltose transport system permease protein MalG n=1267 Tax=Enterobacteriaceae RepID=MALG_ECO57
malG; Part of maltose permease, inner membrane protein; K10110 maltose/maltodextrin transport system permease protein
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EYD96872.1}; TaxID=1444215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-110-08_S4_C1.;"
65_006_scaffold_30_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33991..35535)
DNA (1545bp) protein (515aa)
Fructose-bisphosphate aldolase (EC:4.1.2.13); K10109 maltose/maltodextrin transport system permease protein
UPI0003D600F3 related cluster n=1 Tax=unknown RepID=UPI0003D600F3
Maltose transport system permease protein malF {ECO:0000313|EMBL:ETJ11854.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_30_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35689..36879)
DNA (1191bp) protein (397aa)
Maltose transporter subunit periplasmic-binding component of ABC superfamily n=107 Tax=Escherichia coli RepID=B7NFX8_ECOLU
malE; maltose ABC transporter periplasmic protein; K10108 maltose/maltodextrin transport system substrate-binding protein
Maltose-binding periplasmic protein {ECO:0000313|EMBL:KDW82993.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
65_006_scaffold_30_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37244..38359
DNA (1116bp) protein (372aa)
Maltose/maltodextrin import ATP-binding protein MalK {ECO:0000256|HAMAP-Rule:MF_01709}; EC=3.6.3.19 {ECO:0000256|HAMAP-Rule:MF_01709};; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
malK; maltose/maltodextrin import ATP-binding protein malK; K10111 maltose/maltodextrin transport system ATP-binding protein [EC:3.6.3.19]
UPI0003D5FBC4 related cluster n=1 Tax=unknown RepID=UPI0003D5FBC4
Displaying items 1-30 of 117 in total

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