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65_006_scaffold_71

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Displaying items 1-30 of 64 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_71_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..183)
DNA (183bp) protein (61aa)
gadB; glutamate decarboxylase beta; K01580 glutamate decarboxylase [EC:4.1.1.15]
Glutamate decarboxylase beta n=10 Tax=Escherichia coli RepID=L3AK35_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA65577.1}; Flags: Fragment;; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
65_006_scaffold_71_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(545..3328)
DNA (2784bp) protein (928aa)
pqqL; M16B family peptidase (EC:3.4.24.-); K07263 zinc protease [EC:3.4.24.-]
Putative zinc protease PqqL n=1 Tax=Escherichia coli TA280 RepID=F4V203_ECOLX
Putative zinc protease PqqL {ECO:0000313|EMBL:EGI41181.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
65_006_scaffold_71_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3385..5757)
DNA (2373bp) protein (791aa)
TonB-dependent receptor n=3 Tax=Escherichia coli O44:H18 (strain 042 / EAEC) RepID=D3GSD1_ECO44
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:CBG34449.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
65_006_scaffold_71_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5786..7480)
DNA (1695bp) protein (565aa)
Inner membrane ABC transporter ATP-binding protein YddA n=3 Tax=Escherichia coli RepID=L3YC70_ECOLX
Inner membrane ABC transporter ATP-binding protein YddA {ECO:0000313|EMBL:ETJ11880.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
ABC transporter ATP-binding protein/permease; K02471 putative ATP-binding cassette transporter
65_006_scaffold_71_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7771..8928)
DNA (1158bp) protein (386aa)
UPI0003D5FBAB related cluster n=1 Tax=unknown RepID=UPI0003D5FBAB
Anaerobic sulfatase-maturating enzyme-like protein YdeM {ECO:0000313|EMBL:ETJ11881.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
putative arylsulfatase-activating protein; K06871 uncharacterized protein
65_006_scaffold_71_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8980..10662)
DNA (1683bp) protein (561aa)
putative sulfatase (EC:3.1.6.-)
Putative uncharacterized protein n=2 Tax=Escherichia coli B093 RepID=H1DYB6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ11882.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_71_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11065..11826)
DNA (762bp) protein (254aa)
AraC-family transcriptional regulator n=13 Tax=Escherichia coli RepID=D3GSD5_ECO44
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:ETE24186.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
65_006_scaffold_71_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11901..12098)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Escherichia coli O44:H18 (strain 042 / EAEC) RepID=D3GSD6_ECO44
hypothetical protein
Two-component-system connector protein SafA {ECO:0000313|EMBL:ETJ11884.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_71_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12346..14625)
DNA (2280bp) protein (760aa)
Oxidoreductase alpha (Molybdopterin) subunit n=13 Tax=Escherichia coli RepID=F4V209_ECOLX
Protein ydeP {ECO:0000313|EMBL:ELE43676.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
ydeP; putative oxidoreductase
65_006_scaffold_71_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14964..15878)
DNA (915bp) protein (305aa)
Fimbrial-like adhesin protein n=2 Tax=Escherichia coli RepID=L3P8P1_ECOLX
Fimbrial-like adhesin protein {ECO:0000313|EMBL:ELE43677.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
protein FimH-like protein
65_006_scaffold_71_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15938..16441)
DNA (504bp) protein (168aa)
Fimbrial protein n=201 Tax=Escherichia coli RepID=E0IX90_ECOLW
fimbrial protein domain-containing protein
Protein FimG {ECO:0000313|EMBL:EGU95784.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
65_006_scaffold_71_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16454..16984)
DNA (531bp) protein (177aa)
Protein FimF homolog n=363 Tax=Escherichia coli RepID=B5Z1W2_ECO5E
ydeS; biofilm-dependent modulation protein
Fimbrial protein {ECO:0000313|EMBL:ESA77613.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
65_006_scaffold_71_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16998..19649)
DNA (2652bp) protein (884aa)
UPI0003D5E896 related cluster n=2 Tax=unknown RepID=UPI0003D5E896
Uncharacterized protein {ECO:0000313|EMBL:ETJ21824.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
putative fimbrial outer membrane usher protein; K07347 outer membrane usher protein
65_006_scaffold_71_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19691..20401)
DNA (711bp) protein (237aa)
UPI0003D65150 related cluster n=2 Tax=unknown RepID=UPI0003D65150
Fimbrial chaperone protein {ECO:0000313|EMBL:ETJ21823.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
fimbrial chaperone protein precursor; K07346 fimbrial chaperone protein
65_006_scaffold_71_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20764..21327)
DNA (564bp) protein (188aa)
Fimbrial protein n=641 Tax=Enterobacteriaceae RepID=J7QR22_ECOLX
putative type 1 fimbrial protein; K07345 major type 1 subunit fimbrin (pilin)
Type-1 fimbrial protein, A chain {ECO:0000313|EMBL:ESA78619.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
65_006_scaffold_71_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21761..21910)
DNA (150bp) protein (50aa)
Type-1 fimbrial protein n=12 Tax=Escherichia coli RepID=D6J9V6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ21821.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
AraC family transcriptional regulator
65_006_scaffold_71_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22422..23225)
DNA (804bp) protein (268aa)
putative carboxymuconolactone decarboxylase (EC:4.1.1.44); K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
UPI0003D5CF3E related cluster n=2 Tax=unknown RepID=UPI0003D5CF3E
4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ETJ21820.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_71_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23241..23951)
DNA (711bp) protein (237aa)
Uncharacterized protein n=12 Tax=Escherichia coli RepID=L3YBB7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETY48311.1}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
putative lipoprotein
65_006_scaffold_71_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24082..25101)
DNA (1020bp) protein (340aa)
putative Aryl-alcohol dehydrogenase (NADP(+)) (EC:1.1.1.91)
Oxidoreductase n=74 Tax=Escherichia coli RepID=D6IPX0_ECOLX
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EFJ76062.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
65_006_scaffold_71_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25104..25676)
DNA (573bp) protein (191aa)
NAD(P)H oxidoreductase YRKL ; Putative NADPH-quinone reductase (modulator of drug activity B); Flavodoxin 2 (EC:1.6.99.-)
UPI0003D60475 related cluster n=1 Tax=unknown RepID=UPI0003D60475
Flavodoxin-like protein fold protein {ECO:0000313|EMBL:ETJ21817.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_71_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25827..26390)
DNA (564bp) protein (188aa)
UPI0003D6325F related cluster n=1 Tax=unknown RepID=UPI0003D6325F
Uncharacterized protein {ECO:0000313|EMBL:ETJ21816.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hypothetical protein
65_006_scaffold_71_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26608..27555)
DNA (948bp) protein (316aa)
putative Tas protein (EC:1.1.1.274)
2,5-diketo-D-gluconate reductase n=108 Tax=Escherichia coli RepID=D7JPH9_ECOLX
Aldo/keto reductase family protein {ECO:0000313|EMBL:KDW83345.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
65_006_scaffold_71_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27629..28318)
DNA (690bp) protein (230aa)
Uncharacterized protein n=100 Tax=Escherichia coli RepID=B7N4S9_ECOLU
hypothetical protein
DJ-1/PfpI family protein {ECO:0000313|EMBL:ESA78608.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
65_006_scaffold_71_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28327..28635)
DNA (309bp) protein (103aa)
UPI0003D62770 related cluster n=1 Tax=unknown RepID=UPI0003D62770
Uncharacterized protein {ECO:0000313|EMBL:ETJ21813.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hypothetical protein
65_006_scaffold_71_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28775..29674
DNA (900bp) protein (300aa)
Transcriptional regulator n=91 Tax=Escherichia coli RepID=D6IPX5_ECOLX
putative LysR-family transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:ESA78606.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
65_006_scaffold_71_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29923..30033)
DNA (111bp) protein (37aa)
Uncharacterized protein n=70 Tax=Escherichia coli RepID=L2UC29_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ21811.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_71_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30072..31394)
DNA (1323bp) protein (441aa)
hipA; regulator with HipB; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1]
Regulator with hipB n=74 Tax=Escherichia coli RepID=B7N4T3_ECOLU
Protein HipA {ECO:0000313|EMBL:EFJ76053.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
65_006_scaffold_71_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31394..31660)
DNA (267bp) protein (89aa)
HTH-type transcriptional regulator hipB n=3 Tax=Escherichia coli RepID=L4JNU3_ECOLX
HTH-type transcriptional regulator HipB {ECO:0000313|EMBL:EIH14510.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
hipB; antitoxin HipB
65_006_scaffold_71_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31871..37291)
DNA (5421bp) protein (1807aa)
Predicted protein n=2 Tax=Escherichia coli B354 RepID=D6J9W0_ECOLX
Predicted protein {ECO:0000313|EMBL:EFF12809.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
putative lipoprotein/autotransporter domain-containing protein
65_006_scaffold_71_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37821..39413)
DNA (1593bp) protein (531aa)
lsrK; autoinducer-2 (AI-2) kinase; K11216 autoinducer 2 (AI-2) kinase [EC:2.7.1.-]
Autoinducer AI-2 kinase n=200 Tax=Enterobacteriaceae RepID=B7L7L1_ECO55
Autoinducer 2 kinase LsrK {ECO:0000313|EMBL:EOW07691.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
Displaying items 1-30 of 64 in total

View Taxonomy