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65_006_scaffold_72

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Displaying items 1-30 of 83 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_72_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..714
DNA (714bp) protein (238aa)
Protein rhsD n=6 Tax=Escherichia coli RepID=L4J6F4_ECOLX
RhsG core protein with extension {ECO:0000313|EMBL:ETJ21503.1}; Flags: Fragment;; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hypothetical protein
65_006_scaffold_72_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

695..1186
DNA (492bp) protein (164aa)
Uncharacterized protein n=22 Tax=Escherichia coli RepID=B7L7C7_ECO55
hypothetical protein
Chromosome, complete genome {ECO:0000313|EMBL:CAU96388.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
65_006_scaffold_72_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1701..2072)
DNA (372bp) protein (124aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=D7ZBN0_ECOLX
Helix-turn-helix domain protein {ECO:0000313|EMBL:KEL69329.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
hypothetical protein
65_006_scaffold_72_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2188..3282)
DNA (1095bp) protein (365aa)
tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035457};; Selenophosphate-dependent tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
ybbB; tRNA 2-selenouridine synthase; K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-]
tRNA 2-selenouridine synthase n=1 Tax=Escherichia coli KTE147 RepID=L4J7M6_ECOLX
65_006_scaffold_72_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3351..4277)
DNA (927bp) protein (309aa)
UPI0003D6382C related cluster n=1 Tax=unknown RepID=UPI0003D6382C
HTH-type transcriptional activator AllS {ECO:0000313|EMBL:ETJ24294.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
allS; DNA-binding transcriptional activator of the allD operon; K10972 LysR family transcriptional regulator, transcriptional activator of the allD operon
65_006_scaffold_72_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4507..4989
DNA (483bp) protein (161aa)
allA; ureidoglycolate hydrolase (EC:3.5.3.19); K01483 ureidoglycolate hydrolase [EC:3.5.3.19]
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
Ureidoglycolate lyase n=751 Tax=Enterobacteriaceae RepID=ALLA_ECO57
65_006_scaffold_72_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5067..5882
DNA (816bp) protein (272aa)
HTH-type transcriptional repressor AllR n=585 Tax=Enterobacteriaceae RepID=ALLR_ECO57
allR; DNA-binding transcriptional repressor AllR; K10973 IclR family transcriptional regulator, negative regulator of allantoin and glyoxylate utilization operons
HTH-type transcriptional repressor AllR {ECO:0000313|EMBL:ESD97757.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
65_006_scaffold_72_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5972..7753
DNA (1782bp) protein (594aa)
gcl; glyoxylate carboligase (tartronate-semialdehyde synthase) (EC:4.1.1.47); K01608 tartronate-semialdehyde synthase [EC:4.1.1.47]
UPI0003D59F94 related cluster n=1 Tax=unknown RepID=UPI0003D59F94
Glyoxylate carboligase {ECO:0000313|EMBL:ETJ24297.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_72_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7766..8542
DNA (777bp) protein (259aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hyi; hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
UPI0003D62FB4 related cluster n=1 Tax=unknown RepID=UPI0003D62FB4
65_006_scaffold_72_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8642..9520
DNA (879bp) protein (293aa)
UPI0003D59AFD related cluster n=1 Tax=unknown RepID=UPI0003D59AFD
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ETJ24299.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
2-hydroxy-3-oxopropionate reductase
65_006_scaffold_72_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9691..11133
DNA (1443bp) protein (481aa)
UPI0003D5D2AB related cluster n=1 Tax=unknown RepID=UPI0003D5D2AB
Uncharacterized protein {ECO:0000313|EMBL:ETJ24300.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
ybbW; allantoin transporter; K10975 allantoin permease
65_006_scaffold_72_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11194..12555
DNA (1362bp) protein (454aa)
allB; allantoinase; K01466 allantoinase [EC:3.5.2.5]
Allantoinase {ECO:0000256|HAMAP-Rule:MF_01645}; EC=3.5.2.5 {ECO:0000256|HAMAP-Rule:MF_01645};; Allantoin-utilizing enzyme {ECO:0000256|HAMAP-Rule:MF_01645}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
Allantoinase n=22 Tax=Bacteria RepID=F4UZ95_ECOLX
65_006_scaffold_72_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12612..13913
DNA (1302bp) protein (434aa)
Putative purine permease YbbY n=441 Tax=Enterobacteriaceae RepID=YBBY_ECOLI
xanthine/uracil/vitamin C permease
Putative permease {ECO:0000313|EMBL:ESD88163.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
65_006_scaffold_72_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13935..15080
DNA (1146bp) protein (382aa)
Glycerate kinase 1 {ECO:0000313|EMBL:KEL69318.1}; EC=2.7.1.31 {ECO:0000313|EMBL:KEL69318.1};; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
glxK; glycerate kinase; K00865 glycerate kinase [EC:2.7.1.31]
Glycerate kinase 1 n=1 Tax=Escherichia coli KTE147 RepID=L4J7N6_ECOLX
65_006_scaffold_72_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15209..15994)
DNA (786bp) protein (262aa)
hypothetical protein; K14977 ureidoglycine aminohydrolase [EC:3.5.3.-]
Uncharacterized protein n=354 Tax=Escherichia coli RepID=B6I0G5_ECOSE
Putative allantoin catabolism protein {ECO:0000313|EMBL:EGI47524.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
65_006_scaffold_72_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16005..17240)
DNA (1236bp) protein (412aa)
allC; allantoate amidohydrolase (EC:3.5.3.4); K02083 allantoate deiminase [EC:3.5.3.9]
UPI0003D6358D related cluster n=1 Tax=unknown RepID=UPI0003D6358D
Allantoate amidohydrolase {ECO:0000313|EMBL:ETJ28153.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_72_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17262..18311)
DNA (1050bp) protein (350aa)
Ureidoglycolate dehydrogenase n=30 Tax=Escherichia coli RepID=E3PGE9_ECOH1
ureidoglycolate dehydrogenase
Ureidoglycolate dehydrogenase {ECO:0000313|EMBL:EGP26180.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
65_006_scaffold_72_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18628..20295
DNA (1668bp) protein (556aa)
FdrA protein n=10 Tax=Escherichia coli RepID=D3GW66_ECO44
Protein fdrA {ECO:0000313|EMBL:EHP67714.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
fdrA; FdrA protein; K02381 FdrA protein
65_006_scaffold_72_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20305..21564
DNA (1260bp) protein (420aa)
Uncharacterized protein YlbE n=46 Tax=Escherichia coli RepID=YLBE_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK14954.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
65_006_scaffold_72_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21575..22390
DNA (816bp) protein (272aa)
UPI0003D65E1F related cluster n=1 Tax=unknown RepID=UPI0003D65E1F
Uncharacterized protein {ECO:0000313|EMBL:ETJ22569.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hypothetical protein
65_006_scaffold_72_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22387..23280
DNA (894bp) protein (298aa)
ybcF; carbamate kinase; K00926 carbamate kinase [EC:2.7.2.2]
UPI0003D621F2 related cluster n=1 Tax=unknown RepID=UPI0003D621F2
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_72_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23399..24466)
DNA (1068bp) protein (356aa)
purK; phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E
N5-carboxyaminoimidazole ribonucleotide synthase n=1 Tax=Escherichia coli TA124 RepID=H1FQP3_ECOLX
65_006_scaffold_72_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24463..24972)
DNA (510bp) protein (170aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli
N5-carboxyaminoimidazole ribonucleotide mutase n=1039 Tax=root RepID=PURE_ECO57
65_006_scaffold_72_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25089..25811)
DNA (723bp) protein (241aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
lpxH; UDP-2,3-diacylglucosamine hydrolase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
UPI0003D5D2A5 related cluster n=1 Tax=unknown RepID=UPI0003D5D2A5
65_006_scaffold_72_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25814..26308)
DNA (495bp) protein (165aa)
ppiB; peptidyl-prolyl cis-trans isomerase B (rotamase B) (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
Peptidyl-prolyl cis-trans isomerase n=77 Tax=Escherichia coli RepID=B1LKE4_ECOSM
65_006_scaffold_72_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26482..27867
DNA (1386bp) protein (462aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
Cysteine--tRNA ligase n=785 Tax=Enterobacteriaceae RepID=SYC_ECO24
65_006_scaffold_72_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27903..28424)
DNA (522bp) protein (174aa)
UPI0003D5BBBE related cluster n=1 Tax=unknown RepID=UPI0003D5BBBE
ybcI; hypothetical protein; K07038 inner membrane protein
Inner membrane protein ybcI {ECO:0000313|EMBL:ETJ23723.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_72_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28532..28744)
DNA (213bp) protein (71aa)
Uncharacterized protein n=29 Tax=Enterobacteriaceae RepID=I0VAB1_SHIFL
ybcJ; RNA-binding protein; K14761 ribosome-associated protein
Ribosome-associated protein {ECO:0000313|EMBL:EOW09960.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
65_006_scaffold_72_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28746..29612)
DNA (867bp) protein (289aa)
folD; bifunctional protein FolD; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
Bifunctional protein FolD n=752 Tax=Enterobacteriaceae RepID=FOLD_ECO27
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
65_006_scaffold_72_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30083..30625
DNA (543bp) protein (181aa)
Sfm fimbrial protein, A chain n=881 Tax=Enterobacteriaceae RepID=SFMA_ECO57
fimA; type-1 fimbrial protein, alpha chain, FimA
Type-1 fimbrial protein, A chain {ECO:0000313|EMBL:KDY13932.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
Displaying items 1-30 of 83 in total

View Taxonomy