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65_006_scaffold_92

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_92_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..362
DNA (360bp) protein (120aa)
Uracil permease n=1 Tax=Escherichia coli MP021552.7 RepID=M8K1Z5_ECOLX
uraA; uracil permease; K02824 uracil permease
Uracil permease {ECO:0000313|EMBL:KDZ36560.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
65_006_scaffold_92_2
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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412..1158
DNA (747bp) protein (249aa)
DnaA regulatory inactivator Hda n=887 Tax=Enterobacteriaceae RepID=C3T057_ECOLX
hda; DNA replication initiation factor
DnaA regulatory inactivator Hda {ECO:0000256|HAMAP-Rule:MF_01158, ECO:0000256|SAAS:SAAS00016498}; TaxID=623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri.;"
65_006_scaffold_92_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1264..1623)
DNA (360bp) protein (120aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
Arsenate reductase n=781 Tax=Enterobacteriaceae RepID=B2N3C2_ECOLX
putative glutaredoxin
65_006_scaffold_92_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1644..3107)
DNA (1464bp) protein (488aa)
Beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
Uncharacterized protein n=93 Tax=Escherichia RepID=D2NL51_ECOS5
hypothetical protein
65_006_scaffold_92_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3320..4381
DNA (1062bp) protein (354aa)
Putative permease PerM n=941 Tax=Enterobacteriaceae RepID=PERM_ECO57
hypothetical protein; K03548 putative permease
Uncharacterized protein {ECO:0000313|EMBL:EHW15712.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
65_006_scaffold_92_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4418..5266)
DNA (849bp) protein (283aa)
UPI0003D68657 related cluster n=1 Tax=unknown RepID=UPI0003D68657
Putative formate transporter 2 {ECO:0000313|EMBL:ETJ22713.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
focB; formate transporter; K03459 formate transporter
65_006_scaffold_92_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5288..7300)
DNA (2013bp) protein (671aa)
DNA-binding transcriptional activator, formate sensing n=6 Tax=Escherichia coli RepID=L3Y5W1_ECOLX
DNA-binding transcriptional activator, formate sensing {ECO:0000313|EMBL:ELG87208.1}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
hyfR; DNA-binding transcriptional activator, formate sensing; K12146 hydrogenase-4 transcriptional activator
65_006_scaffold_92_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7330..7743)
DNA (414bp) protein (138aa)
hyfJ; putative processing element hydrogenase 4; K12145 hydrogenase-4 component J [EC:1.-.-.-]
Formate hydrogenlyase maturation protein HycH n=4 Tax=Escherichia coli RepID=D7ZIA7_ECOLX
Formate hydrogenlyase maturation protein HycH {ECO:0000313|EMBL:ESD78659.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
65_006_scaffold_92_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7736..8494)
DNA (759bp) protein (253aa)
hyfI; hydrogenase-4 subunit I (EC:1.-.-.-)
NADH ubiquinone oxidoreductase, 20 Kd subunit n=31 Tax=Escherichia coli RepID=D7ZIA6_ECOLX
Hydrogenase-4 component I {ECO:0000313|EMBL:ETJ24626.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_92_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8491..9036)
DNA (546bp) protein (182aa)
Hydrogenase 4 subunit H n=5 Tax=Escherichia coli RepID=D7ZIA5_ECOLX
Hydrogenase-4 component H {ECO:0000313|EMBL:ETJ24625.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hyfH; hydrogenase 4 subunit H; K12143 hydrogenase-4 component H
65_006_scaffold_92_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9046..10761)
DNA (1716bp) protein (572aa)
hydrogenase-4, G subunit; K12142 hydrogenase-4 component G [EC:1.-.-.-]
Hydrogenase-4, G subunit n=111 Tax=Escherichia coli RepID=B1LND7_ECOSM
Hydrogenase-4 component G {ECO:0000313|EMBL:ELE43407.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
65_006_scaffold_92_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10751..12331)
DNA (1581bp) protein (527aa)
hydrogenase 4 subunit F; K12141 hydrogenase-4 component F [EC:1.-.-.-]
Hydrogenase 4 subunit F n=4 Tax=Escherichia coli RepID=I4S825_ECOLX
NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein {ECO:0000313|EMBL:ELW31977.1}; TaxID=1051347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3.4880.;"
65_006_scaffold_92_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12336..12986)
DNA (651bp) protein (217aa)
hyfE; hydrogenase 4 membrane subunit; K12140 hydrogenase-4 component E [EC:1.-.-.-]
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L n=9 Tax=Escherichia coli RepID=D7ZIA2_ECOLX
Hydrogenase-4 component E {ECO:0000313|EMBL:EOU89920.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
65_006_scaffold_92_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12998..14437)
DNA (1440bp) protein (480aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K12139 hydrogenase-4 component D [EC:1.-.-.-]
Hydrogenase 4 subunit D n=4 Tax=Escherichia coli RepID=I4S827_ECOLX
Hydrogenase 4 subunit D {ECO:0000313|EMBL:ESD78653.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
65_006_scaffold_92_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14454..15401)
DNA (948bp) protein (316aa)
hyfC; hydrogenase-4 subunit C (EC:1.-.-.-); K12138 hydrogenase-4 component C [EC:1.-.-.-]
Hydrogenase 4, membrane subunit n=2 Tax=Escherichia coli RepID=I4S828_ECOLX
NADH dehydrogenase {ECO:0000313|EMBL:ESD78652.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
65_006_scaffold_92_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15412..17430)
DNA (2019bp) protein (673aa)
hyfB; hydrogenase 4 subunit B; K12137 hydrogenase-4 component B [EC:1.-.-.-]
Hydrogenase 4 subunit B n=4 Tax=Escherichia coli RepID=D7ZI98_ECOLX
NADH-ubiquinone/plastoquinone family protein {ECO:0000313|EMBL:ESD78651.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
65_006_scaffold_92_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17430..18047)
DNA (618bp) protein (206aa)
hyfA; hydrogenase 4, 4Fe-4S subunit; K12136 hydrogenase-4 component A [EC:1.-.-.-]
Hydrogenase-4 component A n=3 Tax=Escherichia coli RepID=D7ZI97_ECOLX
Hydrogenase-4 component A {ECO:0000313|EMBL:ESD78650.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
65_006_scaffold_92_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18300..18770)
DNA (471bp) protein (157aa)
bcp; thioredoxin-dependent thiol peroxidase (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Thioredoxin-dependent thiol peroxidase {ECO:0000313|EMBL:EIG82507.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EIG82507.1};; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
Putative peroxiredoxin bcp n=1410 Tax=Enterobacteriaceae RepID=BCP_ECO57
65_006_scaffold_92_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18770..19342)
DNA (573bp) protein (191aa)
Glycine cleavage system transcriptional repressor n=1140 Tax=Enterobacteriaceae RepID=GCVR_ECOLI
gcvR; glycine cleavage system transcriptional repressor; K03567 glycine cleavage system transcriptional repressor
Glycine cleavage system transcriptional repressor {ECO:0000313|EMBL:ELD98367.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
65_006_scaffold_92_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19488..20366
DNA (879bp) protein (293aa)
dapA; dihydrodipicolinate synthase DapA; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1113 Tax=Enterobacteriaceae RepID=DAPA_ECO24
65_006_scaffold_92_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20383..21417
DNA (1035bp) protein (345aa)
Outer membrane protein assembly factor BamC n=643 Tax=Enterobacteriaceae RepID=BAMC_ECOLI
nlpB; lipoprotein; K07287 lipoprotein-34
Outer membrane protein assembly factor BamC {ECO:0000256|HAMAP-Rule:MF_00924}; Flags: Precursor;; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
65_006_scaffold_92_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21328..21558)
DNA (231bp) protein (77aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=L2XHB2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ21728.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hypothetical protein
65_006_scaffold_92_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21630..22343
DNA (714bp) protein (238aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthetase; K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1338 Tax=Enterobacteriaceae RepID=PUR7_ECO24
65_006_scaffold_92_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22511..23374
DNA (864bp) protein (288aa)
Uncharacterized protein YpfJ n=1033 Tax=Enterobacteriaceae RepID=YPFJ_ECO57
hypothetical protein; K07054
Uncharacterized protein {ECO:0000313|EMBL:EOV77362.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
65_006_scaffold_92_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23389..25404
DNA (2016bp) protein (672aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
hypothetical protein; K06957 tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
tRNA(Met) cytidine acetyltransferase TmcA n=4 Tax=Escherichia coli RepID=D7ZI90_ECOLX
65_006_scaffold_92_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25478..26176
DNA (699bp) protein (233aa)
Phospholipase/carboxylesterase n=4 Tax=Escherichia coli RepID=D7ZI89_ECOLX
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ESD78642.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
ypfH; Esterase, AB hydrolase 2 family; K06999 phospholipase/carboxylesterase
65_006_scaffold_92_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26257..26457)
DNA (201bp) protein (67aa)
Membrane protein n=2 Tax=Escherichia coli RepID=V8J174_ECOLX
hypothetical protein
UPF0370 protein YpfN {ECO:0000256|HAMAP-Rule:MF_01566}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
65_006_scaffold_92_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26485..27612)
DNA (1128bp) protein (376aa)
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
Succinyl-diaminopimelate desuccinylase n=103 Tax=Escherichia coli RepID=DAPE_ECOLU
65_006_scaffold_92_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27616..27972)
DNA (357bp) protein (119aa)
Uncharacterized protein n=471 Tax=Enterobacteriaceae RepID=C3T0G5_ECOLX
yffB; ArsC family protein
Reductase {ECO:0000313|EMBL:AIF64355.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
65_006_scaffold_92_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28512..31625)
DNA (3114bp) protein (1038aa)
Aminoglycoside/multidrug efflux system n=307 Tax=Enterobacteriaceae RepID=A1ADX5_ECOK1
Aminoglycoside/multidrug efflux system {ECO:0000313|EMBL:CCQ29866.2}; Multidrug transporter {ECO:0000313|EMBL:KFD75578.1}; Putative multidrug efflux pump {ECO:0000313|EMBL:CKG83579.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
acrD; aminoglycoside/multidrug efflux system protein AcrD; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Displaying items 1-30 of 49 in total

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