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65_006_scaffold_102

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_102_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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244..852
DNA (609bp) protein (203aa)
Uncharacterized GST-like protein YibF n=1098 Tax=Enterobacteriaceae RepID=YIBF_ECOL6
yibF; Putative GST-like protein
Glutathione S-transferase, C-terminal domain protein {ECO:0000313|EMBL:EFJ88705.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
65_006_scaffold_102_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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950..2341
DNA (1392bp) protein (464aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
selA; selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Escherichia coli RepID=L4JG22_ECOLX
65_006_scaffold_102_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2338..4182
DNA (1845bp) protein (615aa)
Selenocysteine-specific translation elongation factor n=6 Tax=Escherichia coli RepID=E0J615_ECOLW
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:ADX48799.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
translation elongation factor
65_006_scaffold_102_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4372..5523
DNA (1152bp) protein (384aa)
yiaY; putative alcohol dehydrogenase (EC:1.1.1.1); K13954 alcohol dehydrogenase [EC:1.1.1.1]
Alcohol dehydrogenase 4 n=5 Tax=Escherichia coli RepID=F7N2N1_ECOLX
Alcohol dehydrogenase 4 {ECO:0000313|EMBL:EGP23134.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
65_006_scaffold_102_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5724..7262
DNA (1539bp) protein (513aa)
Aldehyde dehydrogenase B {ECO:0000313|EMBL:KEJ72381.1}; EC=1.2.1.- {ECO:0000313|EMBL:KEJ72381.1};; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
aldB; aldehyde dehydrogenase; K00138 aldehyde dehydrogenase [EC:1.2.1.-]
Aldehyde dehydrogenase B n=3 Tax=Escherichia coli RepID=L4JEW4_ECOLX
65_006_scaffold_102_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7303..8382)
DNA (1080bp) protein (360aa)
Type I restriction enzyme R protein n=5 Tax=Escherichia coli RepID=F4V7T4_ECOLX
Type I restriction enzyme R protein {ECO:0000313|EMBL:EGI39382.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
hypothetical protein; K07504 hypothetical protein
65_006_scaffold_102_7
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8855..9040
DNA (186bp) protein (62aa)
Uncharacterized protein n=112 Tax=Escherichia coli RepID=B7NEP1_ECOLU
hypothetical protein; K07339 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOU76729.1}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
65_006_scaffold_102_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9057..9467
DNA (411bp) protein (137aa)
Uncharacterized protein n=97 Tax=Escherichia coli RepID=B7NEP0_ECOLU
hypothetical protein
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:EFJ73531.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
65_006_scaffold_102_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9539..11503)
DNA (1965bp) protein (655aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli B354 RepID=D6JGP9_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EFF11160.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
hypothetical protein; K09955 hypothetical protein
65_006_scaffold_102_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11514..12914)
DNA (1401bp) protein (467aa)
Sugar transporter n=17 Tax=Escherichia coli RepID=E9XSL6_ECOLX
Transporter, major facilitator family protein {ECO:0000313|EMBL:EIG80859.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
putative permease of the major facilitator superfamily
65_006_scaffold_102_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13140..13955
DNA (816bp) protein (272aa)
Transcriptional regulator, AraC family n=16 Tax=Escherichia coli RepID=D7ZBD7_ECOLX
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EII21722.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
AraC family transcriptional regulator
65_006_scaffold_102_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13987..14682)
DNA (696bp) protein (232aa)
UPI0003D65A8A related cluster n=1 Tax=unknown RepID=UPI0003D65A8A
L-ribulose-5-phosphate 4-epimerase SgbE {ECO:0000313|EMBL:ETJ23458.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
L-ribulose-5-phosphate 4-epimerase
65_006_scaffold_102_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14676..15536)
DNA (861bp) protein (287aa)
sgbU; putative L-ribulose-5-phosphate 3-epimerase (EC:5.1.3.22); K03082 hexulose-6-phosphate isomerase [EC:5.-.-.-]
UPI0003D5E81E related cluster n=1 Tax=unknown RepID=UPI0003D5E81E
Uncharacterized protein {ECO:0000313|EMBL:ETJ23459.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_102_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15529..16191)
DNA (663bp) protein (221aa)
sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase (EC:4.1.1.85); K03081 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
3-keto-L-gulonate-6-phosphate decarboxylase sgbH n=1 Tax=Escherichia coli B093 RepID=H1DTK4_ECOLX
3-keto-L-gulonate-6-phosphate decarboxylase sgbH {ECO:0000313|EMBL:ETJ23460.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_102_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16188..17684)
DNA (1497bp) protein (499aa)
lyxK; L-xylulose/3-keto-L-gulonate kinase (EC:2.7.1.53); K00880 L-xylulokinase [EC:2.7.1.53]
L-xylulose/3-keto-L-gulonate kinase n=1 Tax=Escherichia coli KTE115 RepID=L4FVL6_ECOLX
Xylulose kinase {ECO:0000313|EMBL:KJH06042.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
65_006_scaffold_102_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17688..18674)
DNA (987bp) protein (329aa)
TRAP transporter solute receptor, DctP family n=3 Tax=Escherichia coli RepID=V6FEB5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EGP23122.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
TRAP transporter solute receptor DctP family protein
65_006_scaffold_102_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18687..19964)
DNA (1278bp) protein (426aa)
2,3-diketo-L-gulonate TRAP transporter large permease protein YiaN n=445 Tax=Enterobacteriaceae RepID=YIAN_ECOLI
yiaN; putative transporter
2,3-diketo-L-gulonate TRAP transporter large permease protein YiaN {ECO:0000313|EMBL:EGI44156.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
65_006_scaffold_102_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19967..20440)
DNA (474bp) protein (158aa)
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM n=12 Tax=Escherichia coli RepID=F4UES6_ECOLX
2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM {ECO:0000313|EMBL:ETJ10423.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
yiaM; transporter
65_006_scaffold_102_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20558..21025)
DNA (468bp) protein (156aa)
UPI0003D5DB1A related cluster n=1 Tax=unknown RepID=UPI0003D5DB1A
Protein YiaL {ECO:0000313|EMBL:ETJ10422.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
yiaL; hypothetical protein
65_006_scaffold_102_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21036..22034)
DNA (999bp) protein (333aa)
2,3-diketo-L-gulonate reductase {ECO:0000256|HAMAP-Rule:MF_00820}; Short=2,3-DKG reductase {ECO:0000256|HAMAP-Rule:MF_00820};; EC=1.1.1.130 {ECO:0000256|HAMAP-Rule:MF_00820};; 3-dehydro-L-gulonate 2-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00820}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
yiaK; 2,3-diketo-L-gulonate reductase; K08092 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
UPI0003D60C0F related cluster n=1 Tax=unknown RepID=UPI0003D60C0F
65_006_scaffold_102_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22235..23083
DNA (849bp) protein (283aa)
HTH-type transcriptional regulator yiaJ n=484 Tax=Escherichia RepID=E2QGT6_ECOLX
yiaJ; Putative transcriptional regulator
Hypothetical transcriptional regulator YiaJ {ECO:0000313|EMBL:ABE09544.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
65_006_scaffold_102_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23185..23658
DNA (474bp) protein (158aa)
Uncharacterized protein n=10 Tax=Escherichia coli RepID=H1C355_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EHP63786.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
yiaI; putative electron transport protein ysaA
65_006_scaffold_102_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23810..25063)
DNA (1254bp) protein (418aa)
avtA; valine--pyruvate aminotransferase (EC:2.6.1.66); K00835 valine--pyruvate aminotransferase [EC:2.6.1.66]
Valine-pyruvate aminotransferase n=2 Tax=Escherichia coli RepID=H1FMJ5_ECOLX
Valine-pyruvate aminotransferase {ECO:0000313|EMBL:ETJ11703.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_102_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25241..27271)
DNA (2031bp) protein (677aa)
malS; alpha-amylase (EC:3.2.1.1); K01176 alpha-amylase [EC:3.2.1.1]
UPI0003D5964A related cluster n=1 Tax=unknown RepID=UPI0003D5964A
Alpha-amylase {ECO:0000313|EMBL:ETJ11704.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_102_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27591..28415
DNA (825bp) protein (275aa)
Protein bax n=1265 Tax=Enterobacteriaceae RepID=BAX_ECOLI
bax; BAX protein; K03796 Bax protein
Bax protein {ECO:0000313|EMBL:ELI21021.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
65_006_scaffold_102_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28523..29701)
DNA (1179bp) protein (393aa)
UPI0003D5F28F related cluster n=1 Tax=unknown RepID=UPI0003D5F28F
Xylose operon regulatory protein {ECO:0000313|EMBL:ETJ20623.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
xylR; DNA-binding transcriptional activator XylR; K02529 LacI family transcriptional regulator
65_006_scaffold_102_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29779..30960)
DNA (1182bp) protein (394aa)
Xylose transport system permease protein XylH n=1077 Tax=Enterobacteriaceae RepID=XYLH_ECO57
xylH; Xylose ABC transporter, membrane component XylH; K10544 D-xylose transport system permease protein
Xylose transport system permease xylH {ECO:0000313|EMBL:EQN22805.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
65_006_scaffold_102_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30938..32479)
DNA (1542bp) protein (514aa)
Xylose import ATP-binding protein XylG {ECO:0000256|HAMAP-Rule:MF_01722}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01722};; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
Xylose import ATP-binding protein XylG n=326 Tax=Enterobacteriaceae RepID=XYLG_ECO57
xylose transporter ATP-binding subunit
65_006_scaffold_102_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32557..33549)
DNA (993bp) protein (331aa)
D-xylose-binding periplasmic protein n=728 Tax=Enterobacteriaceae RepID=E2QGS8_ECOLX
xylF; D-xylose transporter subunit XylF; K10543 D-xylose transport system substrate-binding protein
D-xylose-binding periplasmic protein {ECO:0000313|EMBL:EQP45315.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
65_006_scaffold_102_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33915..35237
DNA (1323bp) protein (441aa)
xylA; xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5]
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1280976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 25 (4-5851939).;"
Xylose isomerase n=126 Tax=Escherichia coli RepID=XYLA_ECOLU
Displaying items 1-30 of 39 in total

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