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65_006_scaffold_144

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_144_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..612
DNA (612bp) protein (204aa)
Protein rhsA (Fragment) n=2 Tax=Escherichia coli RepID=L3YHS9_ECOLX
RHS repeat-associated core domain protein {ECO:0000313|EMBL:KEJ72387.1}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
rhsW7; Type I RHS Protein
65_006_scaffold_144_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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597..971
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=L3YKU4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ20652.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_144_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1256..1765
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=L4J6J9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KEL67259.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
hypothetical protein
65_006_scaffold_144_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1762..3180
DNA (1419bp) protein (473aa)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:KEJ72390.1}; EC=4.1.99.3 {ECO:0000313|EMBL:KEJ72390.1};; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
phr; deoxyribodipyrimidine photolyase, FAD-binding protein; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Deoxyribodipyrimidine photo-lyase n=3 Tax=Escherichia coli RepID=L4J4N3_ECOLX
65_006_scaffold_144_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3222..4703)
DNA (1482bp) protein (494aa)
Dipeptide permease D n=57 Tax=Escherichia coli RepID=C6EJM9_ECOBD
ybgH; putative transporter; K03305 proton-dependent oligopeptide transporter, POT family
Dipeptide permease D {ECO:0000256|HAMAP-Rule:MF_01880}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
65_006_scaffold_144_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4974..5717
DNA (744bp) protein (248aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
Putative GTP cyclohydrolase 1 type 2 n=1216 Tax=Enterobacteriaceae RepID=GTPC1_ECO57
metal-binding protein
65_006_scaffold_144_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5740..6396
DNA (657bp) protein (219aa)
Uncharacterized protein YbgJ n=834 Tax=Enterobacteriaceae RepID=YBGJ_ECO57
allophanate hydrolase subunit 1
TIGR00370 family protein {ECO:0000313|EMBL:EII33156.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
65_006_scaffold_144_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6390..7322
DNA (933bp) protein (311aa)
YbgK protein n=22 Tax=Escherichia coli RepID=D6J820_ECOLX
putative allophanate hydrolase subunit 2
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:EIH13551.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
65_006_scaffold_144_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7312..8046
DNA (735bp) protein (245aa)
UPI0003D5E1F8 related cluster n=1 Tax=unknown RepID=UPI0003D5E1F8
UPF0271 protein YbgL {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
LamB/YcsF-family protein; K07160 UPF0271 protein
65_006_scaffold_144_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8082..8873
DNA (792bp) protein (264aa)
nei; endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase; K05522 endonuclease VIII [EC:3.2.2.- 4.2.99.18]
UPI0003D5A55B related cluster n=1 Tax=unknown RepID=UPI0003D5A55B
Endonuclease 8 {ECO:0000256|HAMAP-Rule:MF_01253}; DNA glycosylase/AP lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; DNA-(apurinic or apyrimidinic site) lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; Endonuclease VIII {ECO:0000256|HAMAP-Rule:MF_01253}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_144_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8870..9916)
DNA (1047bp) protein (349aa)
UPI0003D5C565 related cluster n=1 Tax=unknown RepID=UPI0003D5C565
Protein AbrB {ECO:0000313|EMBL:ETJ23387.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
abrB; protein AbrB; K07120
65_006_scaffold_144_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10069..11130)
DNA (1062bp) protein (354aa)
UPI0003D60A4F related cluster n=2 Tax=unknown RepID=UPI0003D60A4F
Uncharacterized protein {ECO:0000313|EMBL:ETJ23386.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
putative fimbrial protein
65_006_scaffold_144_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11127..11858)
DNA (732bp) protein (244aa)
UPI0003D6346B related cluster n=1 Tax=unknown RepID=UPI0003D6346B
Uncharacterized protein {ECO:0000313|EMBL:ETJ23385.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
ybgP; putative exported chaperone, PapD family
65_006_scaffold_144_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11874..14285)
DNA (2412bp) protein (804aa)
UPI0003D62347 related cluster n=1 Tax=unknown RepID=UPI0003D62347
Uncharacterized protein {ECO:0000313|EMBL:ETJ23384.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
ybgQ; hypothetical protein
65_006_scaffold_144_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14384..14950)
DNA (567bp) protein (189aa)
Fimbrial-like adhesin protein n=2 Tax=Escherichia coli RepID=L3PC08_ECOLX
putative fimbrial-like adhesin protein
Fimbrial-like adhesin protein {ECO:0000313|EMBL:ELE57591.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
65_006_scaffold_144_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15340..16623)
DNA (1284bp) protein (428aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
Citrate synthase n=1084 Tax=Enterobacteriaceae RepID=CISY_ECOL6
65_006_scaffold_144_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16829..16936)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Escherichia coli O81 (strain ED1a) RepID=B7MPL4_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN32150.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
65_006_scaffold_144_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17317..17721
DNA (405bp) protein (135aa)
Succinate dehydrogenase cytochrome b556 subunit n=1 Tax=Escherichia coli HVH 79 (4-2512823) RepID=T6JUF6_ECOLX
sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
Succinate dehydrogenase cytochrome b556 subunit {ECO:0000313|EMBL:EOV81795.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
65_006_scaffold_144_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17715..18062
DNA (348bp) protein (116aa)
Succinate dehydrogenase hydrophobic membrane anchor subunit n=1105 Tax=Enterobacteriaceae RepID=DHSD_ECOL6
sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit; K00242 succinate dehydrogenase membrane anchor subunit
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:EHW24027.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
65_006_scaffold_144_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18062..19828
DNA (1767bp) protein (589aa)
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Escherichia coli TA280 RepID=F4UZT2_ECOLX
65_006_scaffold_144_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19844..20560
DNA (717bp) protein (239aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
Succinate dehydrogenase iron-sulfur subunit n=168 Tax=Escherichia RepID=DHSB_ECOLI
sdhB; succinate dehydrogenase, FeS subunit
65_006_scaffold_144_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20761..23523
DNA (2763bp) protein (921aa)
2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component {ECO:0000313|EMBL:KEJ50872.1}; EC=1.2.4.2 {ECO:0000313|EMBL:KEJ50872.1};; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
2-oxoglutarate dehydrogenase E1 component n=1176 Tax=Enterobacteriaceae RepID=ODO1_ECO57
Displaying 22 items

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