ggKbase home page
Advanced Search
Search Help

65_006_scaffold_95_14

Organism: 65_006_Escherichia_coli_50_20

partial RP 19 / 55 MC: 4 BSCG 20 / 51 MC: 3 ASCG 9 / 38 MC: 1
Location: comp(12615..16109)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2304
  • Evalue 0.0
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 999.99
  • Bit_score: 2299
  • Evalue 0.0
Transcription-repair-coupling factor n=4 Tax=Escherichia coli RepID=H1FGN6_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 999.99
  • Bit_score: 2305
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3495
ATGCCCCCATATGTTGAGGCATATCCTAACGAGAATCTGACAACCGTTATGCCTGAACAATATCGTTATACGCTGCCCGTCAAAGCGGGTGAGCAGCGTCTGCTGGGCGAGTTAACCGGCGCTGCCTGCGCGACGCTGGTAGCGGAAATTGCCGAACGTCACGCCGGTCCGGTGGTACTCATTGCACCAGATATGCAAAATGCTCTGCGTTTGCATGATGAAATTAGCCAGTTTACCGACCAGATGGTGATGAATCTGGCGGACTGGGAAACTCTTCCCTACGACAGTTTTTCGCCTCATCAGGACATTATTTCCTCGCGCCTTTCCACCCTTTACCAGCTACCGACGATGCAGCGTGGCGTACTGATTGTTCCGGTGAATACGCTTATGCAGCGCGTTTGCCCGCACAGTTTTCTCCACGGCCATGCGCTGGTGATGAAAAAAGGTCAGCGCCTGTCACGAGATGCATTACGATCCCAACTGGACAGCGCAGGTTATCGCCATGTTGACCAGGTGATGGAGCACGGCGAATACGCCACGCGCGGCGCATTGCTGGATCTCTTCCCGATGGGGAGTGAGCTGCCTTATCGTCTTGATTTCTTTGATGATGAAATTGACAGTCTGCGGGTGTTTGACGTCGATAGCCAGCGCACGCTGGAGGAAGTAGAAGAGATCAATCTGCTTCCCGCGCACGAATTTCCGACCGATAAAGCGGCAATTGAACTGTTCCGCAGCCAGTGGCGTGATACCTTCGAAGTGAAGCGCGATCCAGAACATATTTATCAGCAAGTGAGTAAAGGCACATTACCTGCCGGGATCGAGTACTGGCAGCCGCTATTCTTCAGCGAACCGCTGCCGCCGCTGTTCAGTTATTTCCCTGCCAATACGCTGTTGGTGAATACTGGCGATCTGGAAAACAGTGCCGAACGTTTCCAGGCTGACACGCTGGCACGTTTTGAAAATCGCGGCGTCGATCCGATGCGTCCACTGTTGCCACCACAATCGCTCTGGCTGCGGGTAGACGAGCTCTTTTCAGAGCTGAAAAACTGGCCGCGTGTGCAGCTAAAAACTGAACATTTACCGACAAAAGCAGCGAATGCCAATTTAGGTTTCCAGAAACTGCCAGACCTGGCCGTTCAGGCACAACAAAAAGCGCCGCTGGATGCGCTACGTAAGTTCCTCGAGACTTTCGACGGTCCGGTGGTGTTCTCGGTAGAAAGTGAAGGTCGCCGTGAAGCGCTGGGTGAACTGCTCGCACGAATTAAAATTGCTCCGCAACGCATTATGCGTCTTGATGAAGCCAGCGACCGTGGGCGTTATCTGATGATTGGCGCTGCCGAACATGGTTTTGTCGATAAGGTGCGTAACCTGGCGCTGATTTGCGAAAGCGATCTGCTCGGTGAACGTGTTGCCCGCCGTCGTCAGGATTCTCGCCGCACCATCAACCCCGATACACTGATCCGCAACCTCGCGGAGCTGCATATTGGCCAGCCGGTGGTCCATCTGGAGCACGGCGTCGGTCGCTATGCCGGAATGACCACGCTGGAAGCGGGCGGCATTACTGGCGAGTATTTGATGCTCACCTATGCCAACGACGCCAAACTGTATGTTCCGGTGTCGTCACTGCATCTGATTAGCCGTTACGCCGGTGGCGCGGAAGAAAACGCCCCGCTGCATAAACTTGGCGGCGATGCGTGGTCACGCGCGCGGCAGAAAGCGGCGGAAAAAGTGCGTGATGTGGCGGCAGAATTGCTGGATATCTACGCGCAACGCGCCGCCAAAGAGGGCTACGCGTTTAAACACGATCGTGAGCAGTATCAGTTGTTCTGCGACAGCTTCCCGTTTGAAACCACGCCGGATCAGGCGCAGGCCATTAATGCGGTGCTTAGCGACATGTGTCAGCCGCTGGCAATGGATCGTCTGGTGTGTGGCGATGTTGGCTTTGGGAAAACTGAAGTCGCGATGCGCGCCGCTTTCCTGGCAGTAGATAACCACAAGCAGGTGGCGGTGCTGGTGCCTACCACCCTTCTCGCGCAGCAGCATTACGACAACTTCCGCGACCGTTTCGCCAACTGGCCGGTACGTATCGAAATGATCTCCCGTTTCCGCAGCGCCAAAGAGCAGACGCAAATCCTTGCGGAAGTGGCGGAAGGGAAAATCGATATTCTGATCGGTACGCACAAACTGCTGCAAAGTGACGTCAAGTTTAAAGATTTAGGCCTGCTGATTGTCGATGAAGAACACCGCTTCGGGGTGCGTCATAAAGAGCGCATTAAAGCGATGCGCGCGAACGTGGATATTCTGACGCTTACCGCTACGCCGATCCCACGTACGCTGAATATGGCGATGAGCGGAATGCGCGATCTGTCGATTATTGCCACGCCGCCCGCCCGTCGTCTGGCGGTCAAAACGTTTGTCCGCGAGTATGACAGTCTGGTGGTCAGGGAGGCGATCCTGCGTGAAATTTTGCGCGGGGGGCAGGTTTATTATCTTTACAATGATGTGGAAAACATCCAGAAAGCCGCCGAACGGCTGGCAGAACTGGTACCTGAAGCGCGGATTGCCATCGGTCACGGGCAGATGCGTGAGCGCGAACTGGAACGGGTGATGAATGATTTCCATCATCAACGTTTCAACGTGCTGGTTTGTACCACCATTATCGAAACCGGGATCGACATCCCGACAGCCAACACCATTATCATTGAACGCGCGGATCACTTCGGTCTGGCGCAGCTGCACCAGTTGCGCGGTCGCGTCGGACGTTCGCATCATCAGGCATATGCATGGCTGCTGACGCCGCATCCAAAAGCGATGACTACCGATGCGCAAAAACGTCTTGAAGCGATTGCCTCGCTGGAAGATCTCGGGGCAGGTTTTGCGCTGGCAACGCACGATCTGGAGATTCGGGGCGCGGGTGAACTGCTTGGCGAAGAACAAAGCGGCTCAATGGAAACCATCGGTTTCTCGCTGTATATGGAGTTGCTGGAAAACGCCGTCGATGCACTGAAAGCCGGACGCGAGCCGTCGCTGGAAGATCTCACCAGCCAGCAAACAGAAGTCGAGCTGCGGATGCCGTCGCTATTGCCAGATGATTTCATTCCTGACGTGAATACGCGTTTGTCGTTCTATAAACGTATTGCCAGCGCCAAAACGGAAAACGAACTGGAAGAGATCAAAGTCGAGCTTATCGATCGCTTCGGCCTGCTGCCGGATCCGGCGCGTACCCTGCTGGATATTGCCCGTCTGCGCCAGCAAGCGCAGAAACTGGGGATCAGGAAGCTGGAAGGTAATGAGAAAGGCGGCGTGATCGAATTTGCCGAGAAGAATCACGTTAATCCGGCATGGCTGATTGGTTTGCTGCAAAAACAGCCGCAGCATTATCGCCTCGATGGCCCGACTCGCCTGAAGTTTATTCAGGATTTGAGCGAGCGAAAAACGCGTATCGAATGGGTACGCCAGTTTATGCGTGAACTGGAAGAGAACGCGATCGCTTAA
PROTEIN sequence
Length: 1165
MPPYVEAYPNENLTTVMPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRSQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEEINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYFPANTLLVNTGDLENSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNWPRVQLKTEHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESEGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDKVRNLALICESDLLGERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGYAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENAIA*