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65_006_scaffold_95

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_95_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17..1450
DNA (1434bp) protein (478aa)
PTS system glucose-specific EIICB component n=1 Tax=Escherichia coli KTE147 RepID=L4J3F4_ECOLX
PTS system glucose-specific EIICB component {ECO:0000313|EMBL:ETJ24506.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
ptsG; ptsG, subunit of enzyme II
65_006_scaffold_95_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1510..3699)
DNA (2190bp) protein (730aa)
Ferric-rhodotorulic acid outer membrane transporter n=1 Tax=Escherichia coli B354 RepID=D6J954_ECOLX
Ferric-rhodotorulic acid outer membrane transporter {ECO:0000313|EMBL:EFF12419.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
fhuE; ferric-rhodotorulic acid outer membrane transporter; K02014 iron complex outermembrane recepter protein
65_006_scaffold_95_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4033..4392
DNA (360bp) protein (120aa)
HIT-like protein HinT n=1041 Tax=Enterobacteriaceae RepID=HINT_ECO57
hinT; purine nucleoside phosphoramidase; K12150 HIT-like protein HinT
HIT domain protein {ECO:0000313|EMBL:END93616.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
65_006_scaffold_95_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4395..4772
DNA (378bp) protein (126aa)
YcfL protein n=1 Tax=Escherichia coli B354 RepID=D6J957_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ24509.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
membrane protein
65_006_scaffold_95_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4786..5427
DNA (642bp) protein (214aa)
Penicillin-binding protein activator LpoB n=1219 Tax=Enterobacteriaceae RepID=LPOB_ECO57
membrane lipoprotein lipid attachment site; K07337 hypothetical protein
Penicillin-binding protein activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889}; Short=PBP activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889};; Flags: Precursor;; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
65_006_scaffold_95_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5408..6232
DNA (825bp) protein (275aa)
thiK; thiamine kinase (EC:2.7.1.89); K07251 thiamine kinase [EC:2.7.1.89]
UPI0003D62B80 related cluster n=1 Tax=unknown RepID=UPI0003D62B80
Thiamine kinase {ECO:0000313|EMBL:ETJ24511.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_95_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6243..7268
DNA (1026bp) protein (342aa)
nagZ; beta-hexosaminidase (EC:3.2.1.52); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
Beta-hexosaminidase n=104 Tax=Escherichia coli RepID=NAGZ_ECO7I
65_006_scaffold_95_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7291..7833
DNA (543bp) protein (181aa)
UPF0227 protein YcfP n=1256 Tax=Enterobacteriaceae RepID=YCFP_ECO24
ycfP; hypothetical protein; K07000
UPF0227 protein YcfP {ECO:0000256|HAMAP-Rule:MF_01047}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
65_006_scaffold_95_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8164..9468
DNA (1305bp) protein (435aa)
ndh; respiratory NADH dehydrogenase 2/cupric reductase; K03885 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase {ECO:0000313|EMBL:ENB29374.1}; EC=1.6.99.3 {ECO:0000313|EMBL:ENB29374.1};; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
NADH dehydrogenase n=567 Tax=Enterobacteriaceae RepID=DHNA_ECOLI
65_006_scaffold_95_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9695..10234
DNA (540bp) protein (180aa)
Uncharacterized protein YcfJ n=809 Tax=Enterobacteriaceae RepID=YCFJ_ECOL6
ycfJ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE29696.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
65_006_scaffold_95_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10296..10991)
DNA (696bp) protein (232aa)
UPI0003D5F8F1 related cluster n=1 Tax=unknown RepID=UPI0003D5F8F1
Uncharacterized protein {ECO:0000313|EMBL:ETJ24516.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
putative DNA-binding transcriptional regulator
65_006_scaffold_95_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11169..11426
DNA (258bp) protein (86aa)
Multiple stress resistance protein BhsA n=1228 Tax=Enterobacteriaceae RepID=BHSA_ECO57
hypothetical protein; K12151 multiple stress resistance protein BhsA
Stress resistance and biofilm formation protein {ECO:0000313|EMBL:EHW20692.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
65_006_scaffold_95_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11509..12468)
DNA (960bp) protein (320aa)
L,D-transpeptidase YcfS n=4 Tax=Escherichia coli RepID=F7MVH0_ECOLX
Putative L,D-transpeptidase YcfS {ECO:0000313|EMBL:ETJ24518.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
ycfS; hypothetical protein
65_006_scaffold_95_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12615..16109)
DNA (3495bp) protein (1165aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=4 Tax=Escherichia coli RepID=H1FGN6_ECOLX
65_006_scaffold_95_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16189..17262)
DNA (1074bp) protein (358aa)
Inner membrane protein YcfT n=7 Tax=Escherichia coli RepID=F4VTQ4_ECOLX
Membrane protein {ECO:0000313|EMBL:EYZ97774.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
ycfT; hypothetical protein
65_006_scaffold_95_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17523..18722
DNA (1200bp) protein (400aa)
Lipoprotein-releasing system transmembrane protein lolC n=1 Tax=Escherichia coli UMEA 3200-1 RepID=T9A6D9_ECOLX
Lipoprotein-releasing system transmembrane protein lolC {ECO:0000313|EMBL:EQX89357.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
ycfU; outer membrane-specific lipoprotein transporter subunit LolC; K09808 lipoprotein-releasing system permease protein
65_006_scaffold_95_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18715..19416
DNA (702bp) protein (234aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
Lipoprotein-releasing system ATP-binding protein LolD n=659 Tax=Enterobacteriaceae RepID=LOLD_ECOL5
cell division protein FtsE
65_006_scaffold_95_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19422..20660
DNA (1239bp) protein (413aa)
Outer membrane-specific lipoprotein transporter subunit membrane component of ABC superfamily n=94 Tax=Escherichia coli RepID=B7LG52_ECO55
lolE; outer membrane-specific lipoprotein transporter subunit LolE; K09808 lipoprotein-releasing system permease protein
Lipoprotein releasing system, transmembrane protein LolE {ECO:0000313|EMBL:ESD71223.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
65_006_scaffold_95_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20689..21600
DNA (912bp) protein (304aa)
ycfX; N-acetyl-D-glucosamine kinase; K00884 N-acetylglucosamine kinase [EC:2.7.1.59]
N-acetyl-D-glucosamine kinase {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012116}; EC=2.7.1.59 {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012130};; GlcNAc kinase {ECO:0000256|HAMAP-Rule:MF_01271}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
N-acetyl-D-glucosamine kinase n=565 Tax=Enterobacteriaceae RepID=NAGK_ECO55
65_006_scaffold_95_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21616..22437
DNA (822bp) protein (274aa)
cobB; NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
NAD-dependent protein deacylase n=78 Tax=Escherichia coli RepID=B7NAZ8_ECOLU
65_006_scaffold_95_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22575..23360)
DNA (786bp) protein (262aa)
Inner membrane protein ycfZ n=1 Tax=Escherichia coli KTE146 RepID=L4JC10_ECOLX
Inner membrane protein ycfZ {ECO:0000313|EMBL:ETJ23064.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hypothetical protein
65_006_scaffold_95_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23357..23818)
DNA (462bp) protein (154aa)
Inner membrane protein ymfA n=1 Tax=Escherichia coli 4_1_47FAA RepID=H1BVP6_ECOLX
Inner membrane protein ymfA {ECO:0000313|EMBL:ETJ23063.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
ymfA; inner membrane protein YmfA
65_006_scaffold_95_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23876..24922)
DNA (1047bp) protein (349aa)
Putrescine-binding periplasmic protein n=303 Tax=Escherichia RepID=B1LI21_ECOSM
potD; polyamine transporter subunit; K11069 spermidine/putrescine transport system substrate-binding protein
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_95_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24919..25713)
DNA (795bp) protein (265aa)
Spermidine/putrescine transport system permease protein PotC n=1392 Tax=Enterobacteriaceae RepID=POTC_ECO57
potC; spermidine/putrescine ABC transporter membrane protein; K11070 spermidine/putrescine transport system permease protein
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KDV27152.1}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
65_006_scaffold_95_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25710..26567)
DNA (858bp) protein (286aa)
Spermidine-putrescine transport system permease n=521 Tax=Enterobacteriaceae RepID=A1AA19_ECOK1
potB; spermidine/putrescine ABC transporter membrane protein
Spermidine/putrescine transport system permease potB {ECO:0000313|EMBL:EQY88893.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
65_006_scaffold_95_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26551..27687)
DNA (1137bp) protein (379aa)
potA; polyamine transporter subunit; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31]
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Spermidine/putrescine import ATP-binding protein PotA n=933 Tax=Enterobacteriaceae RepID=POTA_ECO57
65_006_scaffold_95_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27937..29163
DNA (1227bp) protein (409aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
Peptidase T n=2 Tax=Escherichia coli RepID=F7MVI4_ECOLX
pepT; Peptidase T
65_006_scaffold_95_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29212..30333)
DNA (1122bp) protein (374aa)
50S ribosomal protein L16 arginine hydroxylase n=280 Tax=Escherichia RepID=YCFD_ECOLI
ycfD; hypothetical protein
Cupin domain protein, PF06172 family {ECO:0000313|EMBL:EIH15592.1}; TaxID=869672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0259.;"
65_006_scaffold_95_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30409..31869)
DNA (1461bp) protein (487aa)
phoQ; sensor protein PhoQ; K07637 two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
Sensor protein PhoQ n=591 Tax=Enterobacteriaceae RepID=PHOQ_ECOLI
65_006_scaffold_95_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31869..32540)
DNA (672bp) protein (224aa)
Transcriptional regulatory protein PhoP n=924 Tax=Enterobacteriaceae RepID=PHOP_ECOL6
DNA-binding transcriptional regulator PhoP
Transcriptional regulator {ECO:0000313|EMBL:EZE07750.1}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
Displaying items 1-30 of 48 in total

View Taxonomy