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65_006_scaffold_125_27

Organism: 65_006_Escherichia_coli_50_20

partial RP 19 / 55 MC: 4 BSCG 20 / 51 MC: 3 ASCG 9 / 38 MC: 1
Location: comp(29784..30008)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock-like protein CspD n=1412 Tax=Enterobacteriaceae RepID=CSPD_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 158
  • Evalue 3.60e-36
cspD; stationary phase/starvation inducible regulatory protein CspD; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 158
  • Evalue 1.10e-36
Cold shock domain protein CspD {ECO:0000313|EMBL:KEJ61466.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 74.0
  • Bit_score: 158
  • Evalue 5.00e-36

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 225
ATGGAAAAGGGTACTGTTAAGTGGTTCAACAATGCCAAAGGGTTTGGTTTCATCTGCCCTGAAGGCGGCGGCGAAGATATTTTCGCTCATTATTCCACCATTCAGATGGATGGTTACAGAACGCTAAAAGCTGGACAATCCGTTCAGTTTGATGTCCACCAGGGGCCAAAAGGCAATCACGCCAGTGTTATTGTGCCCGTCGAAGTAGAAGCGGCTGTCGCATAG
PROTEIN sequence
Length: 75
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA*