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65_006_scaffold_125

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
65_006_scaffold_125_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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163..1296
DNA (1134bp) protein (378aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
ATP-binding component of putrescine transport system n=497 Tax=Escherichia RepID=C3TH17_ECOLX
potG; putrescine ABC transporter ATP-binding protein; K11076 putrescine transport system ATP-binding protein
65_006_scaffold_125_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1306..2250
DNA (945bp) protein (315aa)
Putrescine transporter subunit: membrane component of ABC superfamily n=97 Tax=Escherichia coli RepID=B7NAK2_ECOLU
potH; putrescine ABC transporter permease; K11075 putrescine transport system permease protein
Putrescine transport system permease protein PotH {ECO:0000313|EMBL:ESA80804.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
65_006_scaffold_125_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2247..3092
DNA (846bp) protein (282aa)
Putrescine transport system permease protein PotI n=1 Tax=Escherichia coli M605 RepID=F4SW63_ECOLX
Putrescine transport system permease protein PotI {ECO:0000313|EMBL:ETJ24337.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
potI; putrescine ABC transporter membrane protein; K11074 putrescine transport system permease protein
65_006_scaffold_125_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3152..3640
DNA (489bp) protein (163aa)
Inner membrane protein YbjO n=1340 Tax=Enterobacteriaceae RepID=YBJO_ECO57
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KDV38793.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
65_006_scaffold_125_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3681..4808
DNA (1128bp) protein (376aa)
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055322}; EC=2.1.1.189 {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055340};; 23S rRNA(m5U747)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01012}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
rumB; 23S rRNA methyluridine methyltransferase; K03212 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=1 Tax=Escherichia coli TA280 RepID=F4V091_ECOLX
65_006_scaffold_125_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4837..5568)
DNA (732bp) protein (244aa)
Arginine 3rd transport system periplasmic binding protein n=892 Tax=Enterobacteriaceae RepID=E2QIM6_ECOLX
arginine 3rd transport system periplasmic binding protein ArtJ
ABC transporter arginine-binding protein 1 {ECO:0000313|EMBL:EOV64150.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
65_006_scaffold_125_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5794..6462)
DNA (669bp) protein (223aa)
Arginine ABC transporter permease protein ArtM n=1244 Tax=Enterobacteriaceae RepID=ARTM_ECO57
artM; arginine transporter permease subunit ArtM
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein {ECO:0000313|EMBL:EMU64106.1}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
65_006_scaffold_125_8
Escherichia sp. KTE96, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6462..7178)
DNA (717bp) protein (239aa)
Arginine ABC transporter, permease protein n=8 Tax=Escherichia coli RepID=D3GZT2_ECO44
artQ; arginine ABC transporter permease; K09999 arginine transport system permease protein
Arginine ABC transporter permease ArtQ {ECO:0000313|EMBL:EOV89828.1}; TaxID=1182697 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE96.;"
65_006_scaffold_125_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7185..7916)
DNA (732bp) protein (244aa)
Arginine-binding periplasmic protein 1 n=1 Tax=Escherichia coli TA280 RepID=F4V095_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ27898.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
artI; arginine transporter subunit; K09997 arginine transport system substrate-binding protein
65_006_scaffold_125_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7934..8662)
DNA (729bp) protein (243aa)
artP; arginine transporter ATP-binding subunit; K10000 arginine transport system ATP-binding protein [EC:3.6.3.-]
Arginine transport system ATP-binding protein n=2 Tax=Escherichia coli RepID=E6P1P1_ECOD1
Arginine transport ATP-binding protein ArtP {ECO:0000313|EMBL:ESD22296.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
65_006_scaffold_125_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8880..9395)
DNA (516bp) protein (172aa)
YbjP n=2 Tax=Escherichia coli TA280 RepID=F4V097_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ20504.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
ybjP; lipoprotein
65_006_scaffold_125_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9970..11811
DNA (1842bp) protein (614aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli TA280 RepID=F4V098_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ20503.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
putative type III effector protein (pentapeptide repeat protein)
65_006_scaffold_125_13
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12022..12345
DNA (324bp) protein (108aa)
UPF0145 protein YbjQ n=72 Tax=Escherichia RepID=YBJQ_ECO7I
ybjQ; hypothetical protein
UPF0145 protein YbjQ {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=981367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii ECD227.;"
65_006_scaffold_125_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12342..13172
DNA (831bp) protein (277aa)
ybjR; putative cell wall amidase and lipoprotein; K11066 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase AmiD n=1 Tax=Escherichia coli TA280 RepID=F4V0A0_ECOLX
N-acetylmuramoyl-L-alanine amidase AmiD {ECO:0000313|EMBL:ETJ22049.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_125_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13169..14182)
DNA (1014bp) protein (338aa)
Uncharacterized protein ybjS n=425 Tax=Escherichia RepID=E2QIN4_ECOLX
ybjS; hypothetical protein
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ESD86938.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
65_006_scaffold_125_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14281..15711)
DNA (1431bp) protein (477aa)
Putative dTDP-glucose enzyme n=3 Tax=Escherichia coli TA280 RepID=F4V0A2_ECOLX
Putative dTDP-glucose enzyme {ECO:0000313|EMBL:EGI41968.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
ybjT; hypothetical protein
65_006_scaffold_125_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15722..16723)
DNA (1002bp) protein (334aa)
ltaE; L-threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5]
UPI0003D66DC1 related cluster n=1 Tax=unknown RepID=UPI0003D66DC1
Low specificity L-threonine aldolase {ECO:0000313|EMBL:ETJ23025.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
65_006_scaffold_125_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16760..18478)
DNA (1719bp) protein (573aa)
poxB; pyruvate oxidase; K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
Pyruvate oxidase n=1 Tax=Escherichia coli O44:H18 (strain 042 / EAEC) RepID=D3GZU2_ECO44
Pyruvate oxidase {ECO:0000313|EMBL:CBG33788.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
65_006_scaffold_125_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18611..19579)
DNA (969bp) protein (323aa)
HCP oxidoreductase; K11933 NADH oxidoreductase Hcr [EC:1.-.-.-]
NADH oxidoreductase hcr n=2 Tax=Escherichia coli RepID=L3YFI8_ECOLX
NADH oxidoreductase hcr {ECO:0000313|EMBL:EGI51191.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
65_006_scaffold_125_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19591..21243)
DNA (1653bp) protein (551aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hcp; hybrid-cluster [4Fe-2S-2O] protein Hcp in anaerobic terminal reductases; K00378 hydroxylamine reductase [EC:1.7.-.-]
UPI0003D628AC related cluster n=1 Tax=unknown RepID=UPI0003D628AC
65_006_scaffold_125_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21387..22286)
DNA (900bp) protein (300aa)
UPI0003D62A92 related cluster n=1 Tax=unknown RepID=UPI0003D62A92
Uncharacterized protein {ECO:0000313|EMBL:ETJ27792.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
hypothetical protein
65_006_scaffold_125_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22770..23465)
DNA (696bp) protein (232aa)
Aquaporin Z n=485 Tax=Escherichia RepID=AQPZ_ECO57
aqpZ; aquaporin Z; K06188 aquaporin Z
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
65_006_scaffold_125_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23891..25549
DNA (1659bp) protein (553aa)
Uncharacterized protein n=494 Tax=Enterobacteriaceae RepID=E2QIP2_ECOLX
Conserved protein with nucleoside triphosphate hydrolase domain {ECO:0000313|EMBL:AEQ11724.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
hypothetical protein
65_006_scaffold_125_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25546..26538)
DNA (993bp) protein (331aa)
Uncharacterized protein n=460 Tax=Enterobacteriaceae RepID=A7ZJU6_ECO24
hypothetical protein; K09824 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELI32372.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
65_006_scaffold_125_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26653..27768
DNA (1116bp) protein (372aa)
Macrolide-specific efflux protein MacA n=397 Tax=Enterobacteriaceae RepID=A7ZJU7_ECO24
macA; macrolide transporter subunit MacA; K13888 macrolide-specific efflux protein MacA
Macrolide transporter {ECO:0000313|EMBL:EZD33402.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
65_006_scaffold_125_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27765..29711
DNA (1947bp) protein (649aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=679204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 145-7.;"
macB; fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component; K05685 macrolide transport system ATP-binding/permease protein [EC:3.6.3.-]
ABC transporter, ATP-binding protein n=18 Tax=Escherichia coli RepID=E1IQU2_ECOLX
65_006_scaffold_125_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29784..30008)
DNA (225bp) protein (75aa)
Cold shock-like protein CspD n=1412 Tax=Enterobacteriaceae RepID=CSPD_ECO57
cspD; stationary phase/starvation inducible regulatory protein CspD; K03704 cold shock protein (beta-ribbon, CspA family)
Cold shock domain protein CspD {ECO:0000313|EMBL:KEJ61466.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
65_006_scaffold_125_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30331..30651
DNA (321bp) protein (107aa)
ATP-dependent Clp protease adapter protein ClpS n=1383 Tax=Enterobacteriaceae RepID=CLPS_ECO24
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
65_006_scaffold_125_29
Pectobacterium wasabiae, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30682..30759
DNA (78bp) protein (26aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Escherichia coli BIDMC 38 RepID=V3AV33_ECOLX
clpA; ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity; K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
ATP-dependent Clp protease ATP-binding ClpA {ECO:0000313|EMBL:EJS96380.1}; TaxID=1175631 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium wasabiae CFBP 3304.;"
Displaying 29 items

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