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66_004_scaffold_6

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Displaying items 1-30 of 333 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_6_1
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1174
DNA (1173bp) protein (391aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Lysine--tRNA ligase n=2 Tax=Enterobacter cloacae BWH 31 RepID=V3I672_ENTCL
66_004_scaffold_6_2
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1224..1763)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M783_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL57268.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_6_3
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2063..3709
DNA (1647bp) protein (549aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
malate:quinone oxidoreductase; K00116 malate dehydrogenase (quinone) [EC:1.1.5.4]
Probable malate:quinone oxidoreductase n=1 Tax=Cronobacter muytjensii 530 RepID=K8ABW7_9ENTR
66_004_scaffold_6_4
Citrobacter rodentium, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3846..4094)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THR5_CITRI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG89497.1}; TaxID=637910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype; 4280).;"
66_004_scaffold_6_5
Enterobacter cancerogenus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4402..5346
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Pantoea sp. Sc1 RepID=H8DJV0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KGT90107.1}; TaxID=69218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cancerogenus.;"
hypothetical protein
66_004_scaffold_6_6
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5343..5618
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae S611 RepID=V5AW48_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:GAL57270.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_6_7
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5782..6120
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Cronobacter RepID=K8BYQ9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL57271.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_6_8
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6228..6683)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Pantoea agglomerans Tx10 RepID=U4VYV3_ENTAG
Uncharacterized protein {ECO:0000313|EMBL:GAL57272.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_6_trna_5
unknown

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comp(7221..7292)
DNA (72bp)
transferRNA Arg
66_004_scaffold_6_9
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7368..8312)
DNA (945bp) protein (315aa)
Inner membrane protein yfdC n=4 Tax=Enterobacter cloacae complex RepID=V3QMJ0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL57274.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
transporter
66_004_scaffold_6_10
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8619..9377
DNA (759bp) protein (253aa)
Lipoprotein n=1 Tax=Escherichia coli KTE84 RepID=L4EVY0_ECOLX
Putative phospholipid-binding lipoprotein MlaA {ECO:0000313|EMBL:GAL57275.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein; K04754 lipoprotein
66_004_scaffold_6_11
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9438..10799)
DNA (1362bp) protein (454aa)
Long-chain fatty acid transport protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5UXY9_ESCHE
Long-chain fatty acid transport protein {ECO:0000313|EMBL:GAL57276.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
long-chain fatty acid outer membrane transporter
66_004_scaffold_6_12
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11171..11455
DNA (285bp) protein (95aa)
Uncharacterized protein n=2 Tax=Klebsiella oxytoca RepID=G8WDW3_KLEOK
Uncharacterized protein {ECO:0000313|EMBL:GAL57277.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_6_13
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11614..12924
DNA (1311bp) protein (437aa)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022530}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01618, ECO:0000256|SAAS:SAAS00022453};; ACSs {ECO:0000256|HAMAP-Rule:MF_01618}; Acetyl-CoA acyltransferase {ECO:0000256|HAMAP-Rule:MF_01618}; Acyl-CoA ligase {ECO:0000256|HAMAP-Rule:MF_01618}; Beta-ketothiolase {ECO:0000256|HAMAP-Rule:MF_01618}; Fatty acid oxidation complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01618}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteo
fadI; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VNA7_9ENTR
66_004_scaffold_6_14
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12924..15092
DNA (2169bp) protein (723aa)
fadJ; fatty oxidation complex, alpha subunit FadJ (EC:4.2.1.17); K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Fatty acid oxidation complex subunit alpha n=1 Tax=Escherichia coli HVH 169 (4-1075578) RepID=T7KBI4_ECOLX
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01617, ECO:0000256|SAAS:SAAS00051619}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_6_15
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15295..15780
DNA (486bp) protein (162aa)
phosphohistidine phosphatase SixA (EC:3.1.3.-)
phosphohistidine phosphatase n=1 Tax=Enterobacter cloacae RepID=UPI00037CA94E
Phosphohistidine phosphatase {ECO:0000313|EMBL:GAL57280.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_6_16
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15861..16412)
DNA (552bp) protein (184aa)
UPF0115 protein WEU_02955 n=1 Tax=Citrobacter sp. KTE32 RepID=R8VCU8_9ENTR
UPF0115 protein YfcN {ECO:0000256|HAMAP-Rule:MF_01042}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_6_17
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16579..17511
DNA (933bp) protein (311aa)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine methyltransferase PrmB {ECO:0000256|HAMAP-Rule:MF_02125}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
Protein-(Glutamine-N5) methyltransferase, ribosomal protein L3-specific n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3HMN6_ENTCL
66_004_scaffold_6_18
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17554..18639
DNA (1086bp) protein (362aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
PREDICTED: chorismate synthase-like n=1 Tax=Ceratitis capitata RepID=UPI000329A4FD
Chorismate synthase
66_004_scaffold_6_19
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18643..19467
DNA (825bp) protein (275aa)
Penicillin-insensitive murein endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067071}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067077};; D-alanyl-D-alanine-endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623}; Flags: Precursor;; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
mepA; penicillin-insensitive murein endopeptidase; K07261 penicillin-insensitive murein endopeptidase [EC:3.4.24.-]
Penicillin-insensitive murein endopeptidase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=MEPA_CITK8
66_004_scaffold_6_20
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19467..20279
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Enterobacter cloacae complex RepID=J7GE09_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:GAL57285.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_6_21
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20276..20827
DNA (552bp) protein (184aa)
Uncharacterized protein n=15 Tax=Salmonella enterica I RepID=B4A7A7_SALNE
Uncharacterized protein {ECO:0000313|EMBL:GAL57286.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
cytoplasmic protein; K09906 hypothetical protein
66_004_scaffold_6_22
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20855..21130
DNA (276bp) protein (92aa)
YfcL family protein n=1 Tax=Enterobacter cloacae S611 RepID=V5CST6_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:GAL57287.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_6_23
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21174..23180)
DNA (2007bp) protein (669aa)
hypothetical protein; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J2IU75_9ENTR
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_6_24
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23339..24556
DNA (1218bp) protein (406aa)
fabB; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
3-oxoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2THP7_CITRI
3-oxoacyl-[acyl-carrier-protein] synthase I {ECO:0000313|EMBL:GAL57289.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_6_25
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24697..26127
DNA (1431bp) protein (477aa)
Glycosyl hydrolase 1 family protein n=1 Tax=Enterobacter cloacae S611 RepID=V5CSP7_ENTCL
6-phospho-beta-glucosidase BglA {ECO:0000313|EMBL:GAL57290.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
6-phospho-beta-glucosidase
66_004_scaffold_6_26
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26172..27236)
DNA (1065bp) protein (355aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Pantoea sp. Sc1 RepID=H8DTW9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL57291.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_6_27
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27319..28326)
DNA (1008bp) protein (336aa)
Flagellar regulator flk n=1 Tax=Enterobacter cloacae str. Hanford RepID=S7TMH0_ENTCL
Flagellar regulator flk {ECO:0000256|PIRNR:PIRNR020588}; Fluke {ECO:0000256|PIRNR:PIRNR020588}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
flk; flagella biosynthesis regulator
66_004_scaffold_6_28
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28452..29588
DNA (1137bp) protein (379aa)
Erythronate-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019216}; EC=1.1.1.290 {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019244};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein; K03473 erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
Erythronate-4-phosphate dehydrogenase n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=PDXB_CITK8
66_004_scaffold_6_29
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29655..30668
DNA (1014bp) protein (338aa)
USG-1 protein n=110 Tax=Escherichia RepID=A1ADG8_ECOK1
USG protein {ECO:0000313|EMBL:GAL57294.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
usg; semialdehyde dehydrogenase
Displaying items 1-30 of 333 in total

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