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66_004_scaffold_23

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Displaying items 1-30 of 156 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_23_1
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2175
DNA (2175bp) protein (725aa)
Fimbrial usher protein n=1 Tax=Salmonella enterica subsp. houtenae str. ATCC BAA-1581 RepID=H7E4C8_SALHO
Putative outer membrane usher protein YehB {ECO:0000313|EMBL:GAL58656.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_23_2
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2187..3188
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. salamae serovar 58:l,z13,z28:z6 str. 00-0163 RepID=V1F991_SALCE
Uncharacterized protein {ECO:0000313|EMBL:GAL58655.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_23_3
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3247..4287
DNA (1041bp) protein (347aa)
zinc-containing alcohol dehydrogenase superfamily protein (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5]
zinc-binding dehydrogenase n=1 Tax=Aeromonas sp. 159 RepID=UPI0002E00DA7
Quinone oxidoreductase {ECO:0000313|EMBL:GAL58654.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_23_4
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4319..4546
DNA (228bp) protein (76aa)
LysR family transcriptional regulator n=1 Tax=Enterobacter sp. R4-368 RepID=R9VVV5_9ENTR
Putative LysR family transcriptional regulator YhjC {ECO:0000313|EMBL:GAL58653.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
LysR family transcriptional regulator
66_004_scaffold_23_5
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4660..5226
DNA (567bp) protein (189aa)
LysR family transcriptional regulator n=1 Tax=Enterobacter sp. R4-368 RepID=R9VVV5_9ENTR
Putative LysR family transcriptional regulator YhjC {ECO:0000313|EMBL:GAL58653.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
LysR family transcriptional regulator
66_004_scaffold_23_6
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5324..6685
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. (strain 638) RepID=A4W5M6_ENT38
Uncharacterized protein {ECO:0000313|EMBL:GAL58652.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_23_7
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6693..7667)
DNA (975bp) protein (325aa)
Putative UV DNA damage endonuclease n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V4T2_ESCHE
UV DNA damage endonuclease {ECO:0000313|EMBL:GAL58651.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
uvsE; UV DNA damage endonuclease UvsE
66_004_scaffold_23_8
Cedecea neteri, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7744..8388)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1) RepID=F8DTI6_ZYMMA
Uncharacterized protein {ECO:0000313|EMBL:AIR61174.1}; TaxID=158822 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea neteri.;"
hypothetical protein
66_004_scaffold_23_9
Pantoea dispersa, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8385..9047)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1TTH4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ERH61786.1}; TaxID=1358411 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea dispersa EGD-AAK13.;"
glycosyl transferase family protein; K07270 glycosyl transferase, family 25
66_004_scaffold_23_10
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9214..9552
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Cronobacter dublinensis RepID=K8AVB7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL58650.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_23_11
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9549..9962)
DNA (414bp) protein (138aa)
Bleomycin resistance protein BRP n=1 Tax=Erwinia piriflorinigrans CFBP 5888 RepID=V5ZB04_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL58649.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
glyoxalase
66_004_scaffold_23_trna_1
unknown

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comp(10119..10192)
DNA (74bp)
transferRNA Arg
66_004_scaffold_23_12
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10420..11286
DNA (867bp) protein (289aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
Bifunctional protein FolD n=6 Tax=Klebsiella oxytoca RepID=G8WBA2_KLEOK
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_004_scaffold_23_13
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11288..11500
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z4S7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL58647.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_23_14
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11711..13210
DNA (1500bp) protein (500aa)
PTS system glucose-like transporter subunit IIB n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3I464_ENTCL
Glucose-specific phosphotransferase system enzyme IICB component {ECO:0000313|EMBL:GAL58646.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
PTS system glucose-like transporter subunit IIB
66_004_scaffold_23_15
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13300..14316
DNA (1017bp) protein (339aa)
Sugar-binding domain protein n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z4S5_9ENTR
Maltose regulon transcriptional regulator MalI {ECO:0000313|EMBL:GAL58645.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
LacI family transcriptional regulator
66_004_scaffold_23_16
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14377..15762)
DNA (1386bp) protein (462aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QCA6_9ENTR
66_004_scaffold_23_17
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15936..16430
DNA (495bp) protein (165aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
peptidyl-prolyl cis-trans isomerase B (rotamase B); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Enterobacter cloacae S611 RepID=V5B074_ENTCL
66_004_scaffold_23_18
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16433..17155
DNA (723bp) protein (241aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
lpxH; UDP-2,3-diacylglucosamine hydrolase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BCU3_9ENTR
66_004_scaffold_23_19
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17275..17784
DNA (510bp) protein (170aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vuln
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Enterobacter mori RepID=UPI000237C533
66_004_scaffold_23_20
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17781..18848
DNA (1068bp) protein (356aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E
N5-carboxyaminoimidazole ribonucleotide synthase n=1 Tax=Escherichia coli HVH 18 (4-8589585) RepID=T5SF20_ECOLX
N5-carboxyaminoimidazole ribonucleotide synthase
66_004_scaffold_23_21
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19007..20080
DNA (1074bp) protein (358aa)
tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035457};; Selenophosphate-dependent tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
selU; tRNA 2-selenouridine synthase (EC:2.9.1.-); K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-]
tRNA 2-selenouridine synthase n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z4R9_9ENTR
66_004_scaffold_23_22
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20081..20740)
DNA (660bp) protein (220aa)
Binding--dependent transport system inner membrane component family protein n=1 Tax=Enterobacter radicincitans DSM 16656 RepID=J1QTD0_9ENTR
D-methionine ABC transporter permease protein {ECO:0000313|EMBL:GAL58636.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
methionine ABC transporter permease
66_004_scaffold_23_23
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20733..21749)
DNA (1017bp) protein (339aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
Methionine import ATP-binding protein MetN 2 n=42 Tax=Salmonella montevideo RepID=E7VBS3_SALMO
hypothetical protein; K02071 D-methionine transport system ATP-binding protein
66_004_scaffold_23_24
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21742..22563)
DNA (822bp) protein (274aa)
Methionine ABC transporter ATPase n=1 Tax=Enterobacter sp. R4-368 RepID=R9VTB7_9ENTR
D-methionine ABC transporter substrate-binding periplasmic protein {ECO:0000313|EMBL:GAL58634.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
methionine ABC transporter ATPase
66_004_scaffold_23_25
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22750..23892)
DNA (1143bp) protein (381aa)
Putative outer membrane protein n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2SB04_ENTAL
Uncharacterized protein {ECO:0000313|EMBL:GAL58633.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
putative outer membrane protein
66_004_scaffold_23_26
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24074..26488)
DNA (2415bp) protein (805aa)
sugar ABC transporter permease n=1 Tax=Enterobacter cloacae RepID=UPI0003000911
Putative ABC transporter permease protein YbbP {ECO:0000313|EMBL:GAL58632.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_004_scaffold_23_27
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26485..27171)
DNA (687bp) protein (229aa)
Phosphonate ABC transporter ATP-binding protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VVE5_9ENTR
Putative ABC transporter ATP-binding protein YbbA {ECO:0000313|EMBL:GAL58631.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
phosphonate ABC transporter ATP-binding protein
66_004_scaffold_23_28
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27187..27765
DNA (579bp) protein (193aa)
Multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 n=1 Tax=Enterobacter sp. R4-368 RepID=R9VS05_9ENTR
Acyl-CoA thioesterase I {ECO:0000313|EMBL:GAL58630.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1
66_004_scaffold_23_29
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27807..28577
DNA (771bp) protein (257aa)
Oxidoreductase n=4 Tax=Enterobacter cloacae complex RepID=J7GHN2_ENTCL
Putative oxidoreductase YbbO {ECO:0000313|EMBL:GAL58629.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
oxidoreductase
Displaying items 1-30 of 156 in total

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