ggKbase home page

66_004_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 339 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_12_1
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3..1028
DNA (1026bp) protein (342aa)
Collagen adhesin protein n=1 Tax=Enterococcus faecalis (strain ATCC 47077 / OG1RF) RepID=F2MP48_ENTFO
collagen adhesin protein
Collagen adhesin protein {ECO:0000313|EMBL:AEA93565.1}; TaxID=474186 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis (strain ATCC 47077 / OG1RF).;"
66_004_scaffold_12_2
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1153..2748
DNA (1596bp) protein (532aa)
ABC transporter family protein n=20 Tax=Enterococcus faecalis RepID=F0PCJ7_ENTF6
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEN70523.1}; TaxID=525271 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ATCC 29200.;"
ABC transporter, ATP-binding/permease protein
66_004_scaffold_12_3
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2818..3552
DNA (735bp) protein (245aa)
Methylase for ubiquinone/menaquinone biosynthesis n=21 Tax=Enterococcus faecalis RepID=F0PCJ8_ENTF6
methyltransferase domain protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEU94765.1}; TaxID=565641 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis X98.;"
66_004_scaffold_12_4
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3549..3950)
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Enterococcus faecalis (strain ATCC 47077 / OG1RF) RepID=F2MP51_ENTFO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEU94764.1}; TaxID=565641 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis X98.;"
66_004_scaffold_12_5
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4061..5413)
DNA (1353bp) protein (451aa)
Amino acid permease family protein n=145 Tax=Enterococcus faecalis RepID=F0PCK0_ENTF6
amino acid permease family protein
Amino acid permease {ECO:0000313|EMBL:EJU93239.1}; TaxID=1134784 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis 599.;"
66_004_scaffold_12_6
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5584..5769)
DNA (186bp) protein (62aa)
Uncharacterized protein n=269 Tax=Enterococcus RepID=K8FJ19_ENTFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPI30652.1}; TaxID=1244144 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis WKS-26-18-2.;"
66_004_scaffold_12_7
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5950..6255)
DNA (306bp) protein (102aa)
Uncharacterized protein n=64 Tax=Enterococcus faecalis RepID=K8F720_ENTFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOL39387.1}; TaxID=1169288 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0348.;"
66_004_scaffold_12_8
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6607..7368
DNA (762bp) protein (254aa)
Fe-S oxidoreductase n=31 Tax=Enterococcus faecalis RepID=F0PCK3_ENTF6
oxidoreductase
Cysteine-rich domain protein {ECO:0000313|EMBL:EEN74724.1}; TaxID=525278 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX1322.;"
66_004_scaffold_12_9
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7381..8853
DNA (1473bp) protein (491aa)
Iron-sulfur cluster binding protein n=46 Tax=Enterococcus faecalis RepID=F0PCK4_ENTF6
iron-sulfur cluster binding protein
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EPH76543.1}; TaxID=1260365 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis 02-MB-P-10.;"
66_004_scaffold_12_10
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8846..9565
DNA (720bp) protein (240aa)
Uncharacterized protein n=33 Tax=Enterococcus faecalis RepID=F0PCK5_ENTF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN70514.1}; TaxID=525271 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ATCC 29200.;"
66_004_scaffold_12_11
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9786..10334
DNA (549bp) protein (183aa)
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=749497 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX0017.;"
Signal peptidase I n=89 Tax=Enterococcus RepID=Q836K0_ENTFA
66_004_scaffold_12_12
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10445..14035
DNA (3591bp) protein (1197aa)
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000256|HAMAP-Rule:MF_01453, ECO:0000256|SAAS:SAAS00044212}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01453, ECO:0000256|SAAS:SAAS00044217};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01453, ECO:0000256|SAAS:SAAS00044220};; ATP-dependent helicase/nuclease RexB {ECO:0000256|HAMAP-Rule:MF_01453}; TaxID=525271 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis ATCC 29200.;"
ATP-dependent helicase/deoxyribonuclease subunit B n=17 Tax=Enterococcus faecalis RepID=K8F737_ENTFL
exonuclease RexB
66_004_scaffold_12_13
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14028..17822
DNA (3795bp) protein (1265aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=565641 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis X98.;"
ATP-dependent helicase/nuclease subunit A n=20 Tax=Enterococcus faecalis RepID=C2H617_ENTFL
addA; ATP-dependent nuclease subunit A
66_004_scaffold_12_14
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17892..18236
DNA (345bp) protein (115aa)
Predicted transcriptional regulators n=296 Tax=Enterococcus RepID=D4MH36_9ENTE
HxlR-like helix-turn-helix family protein
Transcriptional regulator {ECO:0000313|EMBL:EOI91486.1}; TaxID=1158658 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0298.;"
66_004_scaffold_12_15
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


18555..19601
DNA (1047bp) protein (349aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1158540 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0253.;"
Phenylalanine--tRNA ligase alpha subunit n=287 Tax=Enterococcus RepID=SYFA_ENTFA
66_004_scaffold_12_16
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


19609..22032
DNA (2424bp) protein (808aa)
pheT; phe-tRNA synthetase, beta chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1261557 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis str. Symbioflor 1.;"
Phenylalanine--tRNA ligase beta subunit n=6 Tax=Enterococcus faecalis RepID=K8FG97_ENTFL
66_004_scaffold_12_17
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22230..22895)
DNA (666bp) protein (222aa)
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-) n=254 Tax=Enterococcus RepID=D4MH39_9ENTE
glutamine ABC superfamily ATP binding cassette transporter, membrane protein; K02029 polar amino acid transport system permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:EFM83444.1}; TaxID=749495 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX4248.;"
66_004_scaffold_12_18
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22907..23620)
DNA (714bp) protein (238aa)
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-) n=254 Tax=Enterococcus RepID=D4MH40_9ENTE
amino acid ABC transporter permease; K10040 putative glutamine transport system permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:EFU94866.1}; TaxID=749503 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX0309A.;"
66_004_scaffold_12_19
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23666..24493)
DNA (828bp) protein (276aa)
Amino acid ABC transporter, amino acid-binding protein n=269 Tax=Enterococcus RepID=F0PCL5_ENTF6
amino acid ABC transporter, substrate-binding protein
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EFU94865.1}; TaxID=749503 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX0309A.;"
66_004_scaffold_12_20
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24528..25259)
DNA (732bp) protein (244aa)
Amino acid ABC transporter, ATP-binding protein n=195 Tax=Enterococcus faecalis RepID=F0PCL6_ENTF6
amino acid ABC transporter, ATP-binding protein
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOJ97697.1}; TaxID=1169307 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis EnGen0359.;"
66_004_scaffold_12_21
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25530..26351
DNA (822bp) protein (274aa)
murI; glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3]
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1260359 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis 06-MB-S-04.;"
Glutamate racemase n=133 Tax=Enterococcus RepID=F0PCL7_ENTF6
66_004_scaffold_12_22
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26344..27699
DNA (1356bp) protein (452aa)
rph; ribonuclease PH (EC:2.7.7.56)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|SAAS:SAAS00020486}; EC=2.7.7.56 {ECO:0000256|SAAS:SAAS00104188};; EC=3.6.1.19 {ECO:0000256|SAAS:SAAS00020468};; Ribonuclease PH {ECO:0000256|SAAS:SAAS00104182}; TaxID=1403942 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis DORA_14.;"
Ribonuclease PH n=117 Tax=Enterococcus faecalis RepID=F0PCL8_ENTF6
66_004_scaffold_12_23
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27712..28224
DNA (513bp) protein (171aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=749503 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX0309A.;"
Phosphoesterase n=111 Tax=Enterococcus faecalis RepID=F2MP71_ENTFO
hypothetical protein; K07095
66_004_scaffold_12_24
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28318..29082)
DNA (765bp) protein (255aa)
Transcriptional regulator, DeoR family n=76 Tax=Enterococcus faecalis RepID=K8FJ23_ENTFL
transcriptional regulator, DeoR family
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EPH76558.1}; TaxID=1260365 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis 02-MB-P-10.;"
66_004_scaffold_12_25
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29276..30343
DNA (1068bp) protein (356aa)
L-ascorbate 6-phosphate lactonase, putative n=26 Tax=Enterococcus faecalis RepID=K8F740_ENTFL
L-ascorbate 6-phosphate lactonase, putative
Putative uncharacterized protein {ECO:0000313|EMBL:EEU94742.1}; TaxID=565641 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis X98.;"
66_004_scaffold_12_26
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30361..30819
DNA (459bp) protein (153aa)
PTS system, ascorbate-specific IIA component (EC:2.7.1.-)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=4 Tax=Enterococcus faecalis RepID=E0GHV5_ENTFL
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFM77814.1}; TaxID=749518 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX2134.;"
66_004_scaffold_12_27
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30832..32319
DNA (1488bp) protein (496aa)
PTS system, ascorbate-specific IIC component n=21 Tax=Enterococcus faecalis RepID=K8F749_ENTFL
PTS system, ascorbate-specific IIC component
PTS system ascorbate-specific IIC component {ECO:0000313|EMBL:EEU94740.1}; TaxID=565641 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis X98.;"
66_004_scaffold_12_28
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32334..32633
DNA (300bp) protein (100aa)
PTS system, ascorbate-specific IIB compnent (EC:2.7.1.69)
PTS system, ascorbate-specific IIB compnent n=6 Tax=Enterococcus faecalis RepID=K8F6K7_ENTFL
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFM77812.1}; TaxID=749518 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX2134.;"
66_004_scaffold_12_29
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32647..33285
DNA (639bp) protein (213aa)
Orotidine 5'-phosphate decarboxylase/HUMPS family {ECO:0000313|EMBL:EFM77811.1}; EC=4.1.1.23 {ECO:0000313|EMBL:EFM77811.1};; TaxID=749518 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX2134.;"
Hexulose-6-phosphate synthase / 3-keto-L-gulonate-6-phosphate decarboxylase, putative n=5 Tax=Enterococcus faecalis RepID=K8FJ24_ENTFL
hexulose-6-phosphate synthase / 3-keto-L-gulonate-6-phosphate decarboxylase, putative
66_004_scaffold_12_30
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33290..34150
DNA (861bp) protein (287aa)
L-ribulose-5-phosphate 3-epimerase UlaE (EC:5.1.3.22)
L-ribulose-5-phosphate 3-epimerase UlaE n=81 Tax=Enterococcus faecalis RepID=F0PCM6_ENTF6
Putative hexulose-6-phosphate isomerase {ECO:0000313|EMBL:EFT43540.1}; TaxID=749497 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX0017.;"
Displaying items 1-30 of 339 in total

View Taxonomy