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66_004_scaffold_107

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_107_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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525..1058
DNA (534bp) protein (178aa)
spermidine N1-acetyltransferase; K00657 diamine N-acetyltransferase [EC:2.3.1.57]
Spermidine N1-acetyltransferase, putative n=61 Tax=Staphylococcus epidermidis RepID=Q5HRS5_STAEQ
Spermidine N1-acetyltransferase, putative {ECO:0000313|EMBL:AAW53560.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
66_004_scaffold_107_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1087..2424
DNA (1338bp) protein (446aa)
Orn/Lys/Arg decarboxylase, major domain protein n=1 Tax=Staphylococcus epidermidis VCU118 RepID=H3V844_STAEP
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EES37258.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
lysine decarboxylase
66_004_scaffold_107_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2428..3039
DNA (612bp) protein (204aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase n=22 Tax=Staphylococcus epidermidis RepID=H0DV48_STAEP
66_004_scaffold_107_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3073..3402
DNA (330bp) protein (110aa)
Uncharacterized protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HRS2_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV18557.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
66_004_scaffold_107_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3707..4633
DNA (927bp) protein (309aa)
DNA polymerase III delta' subunit; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III delta' subunit n=9 Tax=Staphylococcus epidermidis RepID=E6JR87_STAEP
DNA polymerase III subunit delta {ECO:0000313|EMBL:ESV18558.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
66_004_scaffold_107_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4635..5438
DNA (804bp) protein (268aa)
Uncharacterized protein n=70 Tax=Staphylococcus epidermidis RepID=Q5HRS0_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53460.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
66_004_scaffold_107_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5485..5802
DNA (318bp) protein (106aa)
Initiation-control protein YabA n=82 Tax=Staphylococcus RepID=YABA_STAEQ
DNA replication intiation control protein YabA
Initiation-control protein YabA {ECO:0000256|SAAS:SAAS00063209}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
66_004_scaffold_107_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5898..6623
DNA (726bp) protein (242aa)
Methyltransferase small domain protein n=15 Tax=Staphylococcus epidermidis RepID=E6JR90_STAEP
O-methyltransferase {ECO:0000313|EMBL:ESV18561.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
66_004_scaffold_107_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6616..6864
DNA (249bp) protein (83aa)
GIY-YIG catalytic domain protein n=26 Tax=Staphylococcus epidermidis RepID=C5QTV6_STAEP
hypothetical protein; K07461 putative endonuclease
Uncharacterized protein {ECO:0000313|EMBL:ESV18562.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
66_004_scaffold_107_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6866..7705
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
tetrapyrrole family methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Staphylococcus epidermidis VCU118 RepID=H3V852_STAEP
66_004_scaffold_107_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7917..9887
DNA (1971bp) protein (657aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
metS; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=2 Tax=Staphylococcus epidermidis RepID=H3V853_STAEP
66_004_scaffold_107_12

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9912..10685
DNA (774bp) protein (258aa)
deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-]
Deoxyribonuclease, TatD family n=64 Tax=Staphylococcus epidermidis RepID=Q5HRR4_STAEQ
TatD deoxyribonuclease {ECO:0000313|EMBL:ETJ21226.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
66_004_scaffold_107_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10892..11437
DNA (546bp) protein (182aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
primase-related protein; K05985 ribonuclease M5 [EC:3.1.26.8]
Ribonuclease M5 n=28 Tax=Staphylococcus epidermidis RepID=C5QTW0_STAEP
66_004_scaffold_107_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


11438..12328
DNA (891bp) protein (297aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1344987 species="Bacteria; Firmicutes; B
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A n=25 Tax=Staphylococcus epidermidis RepID=C5QTW1_STAEP
66_004_scaffold_107_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12428..12691
DNA (264bp) protein (88aa)
Uncharacterized protein n=85 Tax=Staphylococcus RepID=Q5HRR1_STAEQ
veg protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53477.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
66_004_scaffold_107_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13086..13934
DNA (849bp) protein (283aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=3 Tax=Staphylococcus epidermidis RepID=C5QTW3_STAEP
66_004_scaffold_107_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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13949..14773
DNA (825bp) protein (275aa)
Pur operon repressor PurR n=9 Tax=Staphylococcus epidermidis RepID=C5QTW4_STAEP
Pur operon repressor PurR {ECO:0000313|EMBL:EES37273.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
pur operon repressor; K09685 purine operon repressor
66_004_scaffold_107_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14795..15175
DNA (381bp) protein (127aa)
Putative endoribonuclease L-PSP n=8 Tax=Staphylococcus epidermidis RepID=C5QTW5_STAEP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EES37274.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
translation initiation inhibitor-like protein; K07567 TdcF protein
66_004_scaffold_107_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15235..15543
DNA (309bp) protein (103aa)
Putative septation protein SpoVG n=84 Tax=Staphylococcus RepID=SP5G_STAEQ
spoVG; regulatory protein SpoVG; K06412 stage V sporulation protein G
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
66_004_scaffold_107_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16154..17509
DNA (1356bp) protein (452aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
Bifunctional protein GlmU n=4 Tax=Staphylococcus epidermidis RepID=C5QTW7_STAEP
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
66_004_scaffold_107_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17654..18619
DNA (966bp) protein (322aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase {ECO:0000255|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000255|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000255|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000255|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000255|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000255|HAMAP-Rule:MF_00583}; Short=P-Rib-PP synthase {ECO:0000255|HAMAP-Rule:MF_00583};; Short=PRPP synthase {ECO:0000255|HAMAP-Rule:MF_00583};; Short=PRPPase
Ribose-phosphate pyrophosphokinase n=83 Tax=Staphylococcus epidermidis RepID=KPRS_STAEQ
66_004_scaffold_107_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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18789..19448
DNA (660bp) protein (220aa)
50S ribosomal protein L25 n=13 Tax=Staphylococcus epidermidis RepID=C5QTW9_STAEP
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25
66_004_scaffold_107_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19701..20273
DNA (573bp) protein (191aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
Peptidyl-tRNA hydrolase n=4 Tax=Staphylococcus epidermidis RepID=C5QTX0_STAEP
66_004_scaffold_107_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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20279..23779
DNA (3501bp) protein (1167aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=4 Tax=Staphylococcus epidermidis RepID=J0EYV0_STAEP
66_004_scaffold_107_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23769..25310
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis BVS058A4 RepID=K8N8R1_STAEP
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EES37281.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
polysaccharide biosynthesis protein; K03328 polysaccharide transporter, PST family
66_004_scaffold_107_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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25307..26497
DNA (1191bp) protein (397aa)
Tetrapyrrole methylase family protein n=49 Tax=Staphylococcus epidermidis RepID=Q5HRQ0_STAEQ
tetrapyrrole methylase; K02499 tetrapyrrole methylase family protein / MazG family protein
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EFE60100.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
66_004_scaffold_107_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26494..26757
DNA (264bp) protein (88aa)
S4 domain protein n=18 Tax=Staphylococcus epidermidis RepID=C5Q669_STAEP
S4 domain-containing protein
S4 domain protein {ECO:0000313|EMBL:EFE60101.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
66_004_scaffold_107_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26781..27182
DNA (402bp) protein (134aa)
Cell-division protein DivIC, putative n=53 Tax=Staphylococcus epidermidis RepID=Q5HRP8_STAEQ
cell-division protein DivIC; K13052 cell division protein DivIC
Septum formation initiator {ECO:0000313|EMBL:EFE60102.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
66_004_scaffold_107_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27276..27677
DNA (402bp) protein (134aa)
S1 RNA binding domain protein n=15 Tax=Staphylococcus epidermidis RepID=F3T0B7_STAEP
hypothetical protein; K07571 S1 RNA binding domain protein
S1 RNA binding domain protein {ECO:0000313|EMBL:EFE60103.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
66_004_scaffold_107_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27955..29253
DNA (1299bp) protein (433aa)
MesJ/Ycf62 family protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
tRNA(Ile)-lysidine synthase n=17 Tax=Staphylococcus epidermidis RepID=C5Q673_STAEP
Displaying items 1-30 of 33 in total

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