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66_004_scaffold_146

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_146_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..440
DNA (438bp) protein (146aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=39 Tax=Staphylococcus epidermidis RepID=Q8CU96_STAES
hypothetical protein
66_004_scaffold_146_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(838..3519)
DNA (2682bp) protein (894aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=16 Tax=Staphylococcus epidermidis RepID=C5QYN3_STAEP
66_004_scaffold_146_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3556..5487)
DNA (1932bp) protein (644aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=20 Tax=Staphylococcus epidermidis RepID=C5QYN4_STAEP
66_004_scaffold_146_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5498..6613)
DNA (1116bp) protein (372aa)
DNA replication and repair protein RecF n=1 Tax=Staphylococcus epidermidis NIHLM023 RepID=J1ABB6_STAEP
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
recF; recombination protein F; K03629 DNA replication and repair protein RecF
66_004_scaffold_146_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6610..6846)
DNA (237bp) protein (79aa)
Uncharacterized protein n=76 Tax=Staphylococcus epidermidis RepID=Q5HK01_STAEQ
hypothetical protein
RNA-binding protein {ECO:0000313|EMBL:ESV21052.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
66_004_scaffold_146_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7279..8412)
DNA (1134bp) protein (378aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta n=37 Tax=Staphylococcus epidermidis RepID=C5QYN7_STAEP
66_004_scaffold_146_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8724..10079)
DNA (1356bp) protein (452aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Staphylococcus epidermidis RepID=J0F2I8_STAEP
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
dnaA; chromosome replication initiator DnaA; K02313 chromosomal replication initiator protein
66_004_scaffold_146_8
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11124..11471
DNA (348bp) protein (116aa)
rnpA; ribonuclease P (EC:3.1.26.5); K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Ribonuclease P protein component n=70 Tax=Staphylococcus epidermidis RepID=RNPA_STAEQ
66_004_scaffold_146_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11617..12996
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE n=21 Tax=Staphylococcus epidermidis RepID=E6JQI2_STAEP
66_004_scaffold_146_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13069..14946
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=46 Tax=Staphylococcus epidermidis RepID=MNMG_STAEQ
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
66_004_scaffold_146_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14946..15665
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G n=23 Tax=Staphylococcus epidermidis RepID=E6JQI4_STAEP
66_004_scaffold_146_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15709..16548
DNA (840bp) protein (280aa)
ParB-like protein n=20 Tax=Staphylococcus epidermidis RepID=C5QYP4_STAEP
ParB-like protein {ECO:0000313|EMBL:EES35522.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
DNA-binding protein Spo0J-like protein; K03497 chromosome partitioning protein, ParB family
66_004_scaffold_146_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16810..16971
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=H3WGV6_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58694.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
66_004_scaffold_146_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16934..17308
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Staphylococcus epidermidis RepID=C5QAL3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35524.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
66_004_scaffold_146_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17324..17719
DNA (396bp) protein (132aa)
Uncharacterized protein n=72 Tax=Staphylococcus epidermidis RepID=Q5HS29_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV21042.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
66_004_scaffold_146_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17685..18224
DNA (540bp) protein (180aa)
Transcriptional regulator, TetR family n=23 Tax=Staphylococcus epidermidis RepID=C5QYP8_STAEP
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EES35526.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
transcriptional regulator
66_004_scaffold_146_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18444..19013
DNA (570bp) protein (190aa)
DNA-binding helix-turn-helix protein n=8 Tax=Staphylococcus epidermidis RepID=C5QYP9_STAEP
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EES35527.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
66_004_scaffold_146_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19204..19833)
DNA (630bp) protein (210aa)
Uncharacterized protein n=3 Tax=Staphylococcus epidermidis RepID=C5QYQ0_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35528.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
66_004_scaffold_146_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20071..21189
DNA (1119bp) protein (373aa)
RND family efflux transporter, MFP component n=1 Tax=Staphylococcus epidermidis VCU118 RepID=H3V9I3_STAEP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EES35529.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
RND efflux transporter; K02005 HlyD family secretion protein
66_004_scaffold_146_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21186..21872
DNA (687bp) protein (229aa)
ABC transporter family protein n=9 Tax=Staphylococcus epidermidis RepID=E6JQJ2_STAEP
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESV21037.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
66_004_scaffold_146_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21865..22638
DNA (774bp) protein (258aa)
ABC transporter, permease protein n=2 Tax=Staphylococcus epidermidis RepID=J0GJV3_STAEP
ABC transporter permease {ECO:0000313|EMBL:ESV21036.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
Displaying 21 items

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