ggKbase home page

66_004_scaffold_193

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_193_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..1302)
DNA (1302bp) protein (434aa)
EVE domain protein n=3 Tax=Staphylococcus epidermidis RepID=H3WQ06_STAEP
EVE domain protein {ECO:0000313|EMBL:ESV19707.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
66_004_scaffold_193_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1535..1762)
DNA (228bp) protein (76aa)
Uncharacterized protein n=28 Tax=Staphylococcus epidermidis RepID=F3SYE9_STAEP
Membrane protein {ECO:0000313|EMBL:ESV19708.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
66_004_scaffold_193_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1818..2756)
DNA (939bp) protein (313aa)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EES37316.1}; EC=5.3.1.8 {ECO:0000313|EMBL:EES37316.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
mannnose-6 phospate isomelase pmi; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8]
Mannose-6-phosphate isomerase, class I n=11 Tax=Staphylococcus epidermidis RepID=C5QTT4_STAEP
66_004_scaffold_193_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3051..3200)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis FRI909 RepID=E6JRG4_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37317.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
66_004_scaffold_193_5

Not on your lists

comp(3398..4054)
DNA (657bp) protein (219aa)
Uncharacterized protein n=14 Tax=Staphylococcus epidermidis RepID=Q8CRL4_STAES
hypothetical protein
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ETJ19276.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
66_004_scaffold_193_6

Not on your lists

4178..4540
DNA (363bp) protein (121aa)
Repressor protein n=42 Tax=Staphylococcus epidermidis RepID=Q8CNH3_STAES
repressor protein
Transcriptional regulator CzrA {ECO:0000313|EMBL:ETJ19277.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
66_004_scaffold_193_7

Not on your lists

4527..5480
DNA (954bp) protein (318aa)
CzrB protein n=50 Tax=Staphylococcus epidermidis RepID=Q8CNH2_STAES
cation efflux family protein; K03295 cation efflux system protein, CDF family
CzrB protein {ECO:0000313|EMBL:ETJ19278.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
66_004_scaffold_193_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5741..6517)
DNA (777bp) protein (259aa)
Uncharacterized protein n=50 Tax=Staphylococcus epidermidis RepID=Q8CRL3_STAES
hypothetical protein
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:EFE60194.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
66_004_scaffold_193_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6605..7756
DNA (1152bp) protein (384aa)
Lytic regulatory protein, putative n=40 Tax=Staphylococcus epidermidis RepID=Q5HM71_STAEQ
lytic regulatory protein
Lytic regulatory protein, putative {ECO:0000313|EMBL:AAW55103.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
66_004_scaffold_193_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8061..8918)
DNA (858bp) protein (286aa)
Cof-like hydrolase n=3 Tax=Staphylococcus epidermidis RepID=H3V8B1_STAEP
HAD family hydrolase {ECO:0000313|EMBL:ESV19715.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
HAD-superfamily cof-like hydrolase; K07024
66_004_scaffold_193_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9419..11224)
DNA (1806bp) protein (602aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=525376 species="Bacte
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=4 Tax=Staphylococcus epidermidis RepID=H0DW94_STAEP
66_004_scaffold_193_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11265..11420)
DNA (156bp) protein (52aa)
Uncharacterized protein n=11 Tax=Staphylococcus epidermidis RepID=C5QTU3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37325.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
66_004_scaffold_193_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11855..13210)
DNA (1356bp) protein (452aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10]
Phosphoglucosamine mutase n=21 Tax=Staphylococcus epidermidis RepID=C5QTU4_STAEP
66_004_scaffold_193_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13235..14170)
DNA (936bp) protein (312aa)
YbbR-like protein n=24 Tax=Staphylococcus epidermidis RepID=C5QTU5_STAEP
YbbR-like protein {ECO:0000313|EMBL:EES37327.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
66_004_scaffold_193_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14171..15052)
DNA (882bp) protein (294aa)
TIGR00159 family protein n=26 Tax=Staphylococcus epidermidis RepID=C5QTU6_STAEP
TIGR00159 family protein {ECO:0000313|EMBL:EES37328.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
66_004_scaffold_193_trna_2
unknown

Not on your lists

comp(15146..15218)
DNA (73bp)
transferRNA Lys
66_004_scaffold_193_trna_1
unknown

Not on your lists

comp(15225..15296)
DNA (72bp)
transferRNA Gln
66_004_scaffold_193_16
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15434..15664)
DNA (231bp) protein (77aa)
Uncharacterized protein n=226 Tax=Streptococcus RepID=B1IB29_STRPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFN94674.1}; TaxID=246201 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis NCTC 12261.;"
66_004_scaffold_193_17
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15762..16724)
DNA (963bp) protein (321aa)
Oligopeptide-binding protein AliB n=3 Tax=Streptococcus mitis RepID=E1M476_STRMT
Peptide-binding protein {ECO:0000313|EMBL:ETD97909.1}; TaxID=1415766 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis 27/7.;"
ABC transporter substrate-binding lipoprotein-oligopeptide transport; K15580 oligopeptide transport system substrate-binding protein
Displaying 19 items

View Taxonomy