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66_004_scaffold_201

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_201_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2..331
DNA (330bp) protein (110aa)
LysM domain protein n=2 Tax=Staphylococcus epidermidis RepID=J0ZEQ7_STAEP
CHAP domain protein {ECO:0000313|EMBL:EES36750.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
LysM domain-containing protein
66_004_scaffold_201_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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640..1281
DNA (642bp) protein (214aa)
HD domain protein n=21 Tax=Staphylococcus epidermidis RepID=H0DZ43_STAEP
HD domain-containing protein; K07023 putative hydrolases of HD superfamily
Hydrolase {ECO:0000313|EMBL:ESV19055.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
66_004_scaffold_201_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1287..1520
DNA (234bp) protein (78aa)
Uncharacterized protein n=18 Tax=Staphylococcus epidermidis RepID=C5QVG0_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES36752.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
66_004_scaffold_201_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2076..4061
DNA (1986bp) protein (662aa)
UvrABC system protein B n=8 Tax=Staphylococcus epidermidis RepID=C5QVG1_STAEP
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; UvrABC system protein B; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B
66_004_scaffold_201_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4069..6903
DNA (2835bp) protein (945aa)
UvrABC system protein A n=3 Tax=Staphylococcus epidermidis RepID=E6JLW1_STAEP
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
66_004_scaffold_201_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7256..8188
DNA (933bp) protein (311aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hprK; HPr kinase/phosphorylase (EC:2.7.1.-); K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
HPr kinase/phosphorylase n=25 Tax=Staphylococcus epidermidis RepID=C5QVG3_STAEP
66_004_scaffold_201_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8194..9033
DNA (840bp) protein (280aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase n=7 Tax=Staphylococcus epidermidis RepID=C5QVG4_STAEP
66_004_scaffold_201_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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9030..9566
DNA (537bp) protein (179aa)
Bacterial transferase hexapeptide repeat protein n=13 Tax=Staphylococcus epidermidis RepID=C5QVG5_STAEP
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EES36757.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
O-acetyltransferase
66_004_scaffold_201_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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9533..10972
DNA (1440bp) protein (480aa)
Tetratricopeptide repeat protein n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QVG6_STAEP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EES36758.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
yvcD; hypothetical protein
66_004_scaffold_201_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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11037..11969
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=8 Tax=Staphylococcus epidermidis RepID=C5QVG7_STAEP
66_004_scaffold_201_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12145..13053
DNA (909bp) protein (303aa)
UPF0042 nucleotide-binding protein HMPREF0791_0661 n=7 Tax=Staphylococcus epidermidis RepID=C5QVG8_STAEP
Nucleotide-binding protein HMPREF0791_0661 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K06958 UPF0042 nucleotide-binding protein
66_004_scaffold_201_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13053..14048
DNA (996bp) protein (332aa)
Gluconeogenesis factor n=4 Tax=Staphylococcus epidermidis RepID=C5QVG9_STAEP
Gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
66_004_scaffold_201_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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14179..15123
DNA (945bp) protein (315aa)
Putative sporulation transcription regulator WhiA n=10 Tax=Staphylococcus epidermidis RepID=C5QVH0_STAEP
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K09762 hypothetical protein
66_004_scaffold_201_trna_1
unknown

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comp(15191..15262)
DNA (72bp)
transferRNA Arg
66_004_scaffold_201_14
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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15451..15717
DNA (267bp) protein (89aa)
ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; TaxID=451516 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus (strain USA300 / TCH1516).;"
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Staphylococcus capitis RepID=B9CQW2_STACP
Displaying 15 items

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