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66_004_scaffold_38

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Displaying items 1-30 of 119 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_38_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..944)
DNA (942bp) protein (314aa)
VanW-related protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSI3_CLOPF
von Willebrand factor A
VanW-related protein {ECO:0000313|EMBL:EDT27511.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_38_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1201..2172
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVM1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17339.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein; K01163 hypothetical protein
66_004_scaffold_38_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2162..2359)
DNA (198bp) protein (66aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CVM0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27609.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_38_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2378..2566)
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CVL9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17337.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_38_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2813..3544)
DNA (732bp) protein (244aa)
CobB/CobQ family glutamine amidotransferase n=7 Tax=Clostridium perfringens RepID=H7CVL8_CLOPF
CobB/CobQ family glutamine amidotransferase; K07009
CobB/CobQ family glutamine amidotransferase {ECO:0000313|EMBL:EIA17336.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_38_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3562..4869)
DNA (1308bp) protein (436aa)
Mur ligase family protein n=6 Tax=Clostridium perfringens RepID=H7CVL7_CLOPF
Mur ligase family protein {ECO:0000313|EMBL:EIA17335.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
UDP-N-acetylmuramyl tripeptide synthetase
66_004_scaffold_38_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5168..6145
DNA (978bp) protein (326aa)
manA; mannose-6-phosphate isomerase (EC:5.3.1.8); K01809 mannose-6-phosphate isomerase [EC:5.3.1.8]
Mannose-6-phosphate isomerase, class I n=8 Tax=Clostridium perfringens RepID=H7CVL6_CLOPF
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:BAB80893.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_38_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6405..7319
DNA (915bp) protein (305aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase n=4 Tax=Clostridium perfringens RepID=H7CVL5_CLOPF
66_004_scaffold_38_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7529..8629
DNA (1101bp) protein (367aa)
pfk; 6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase 2 n=5 Tax=Clostridium perfringens PF2_CLOPE">RepID=K6PF2_CLOPE
Phosphofructokinase family protein {ECO:0000313|EMBL:EDT27625.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_38_10
unknown

Not on your lists

8726..8908
DNA (183bp) protein (61aa)

This feature has no annotations

66_004_scaffold_38_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8862..9641
DNA (780bp) protein (260aa)
beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6]
Beta-lactamase n=8 Tax=Clostridium perfringens RepID=H7CVL3_CLOPF
Putative beta-lactamase {ECO:0000313|EMBL:EDT15680.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_38_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10053..10976
DNA (924bp) protein (308aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Aspartate carbamoyltransferase n=6 Tax=Clostridium perfringens RepID=PYRB_CLOP1
66_004_scaffold_38_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10981..11139
DNA (159bp) protein (53aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CVL1_CLOPF
hypothetical protein
Aspartate carbamoyltransferase regulatory chain {ECO:0000313|EMBL:EDT15713.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_38_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11161..12360
DNA (1200bp) protein (400aa)
pyrC; dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3]
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Dihydroorotase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STN5_CLOPS
66_004_scaffold_38_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12370..13233
DNA (864bp) protein (288aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
Orotidine 5'-phosphate decarboxylase n=4 Tax=Clostridium perfringens RepID=B1BLS5_CLOPF
66_004_scaffold_38_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13258..13998
DNA (741bp) protein (247aa)
pyrK; dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2); K02823 dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRD7_CLOPF
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_38_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14017..14916
DNA (900bp) protein (300aa)
pyrD; dihydroorotate dehydrogenase 1B; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Dihydroorotate dehydrogenase n=1 Tax=Clostridium perfringens F262 RepID=H7CVK7_CLOPF
66_004_scaffold_38_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15067..15645
DNA (579bp) protein (193aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10]
Orotate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000255|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000255|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000255|HAMAP-Rule:MF_01208};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Orotate phosphoribosyltransferase n=8 Tax=Clostridium perfringens RepID=PYRE_CLOP1
66_004_scaffold_38_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15974..16396
DNA (423bp) protein (141aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridium perfringens RepID=B1BLS1_CLOPF
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS79251.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
acetyltransferase
66_004_scaffold_38_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16517..16939)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQK5_CLOPF
Acetyltransferase domain protein {ECO:0000313|EMBL:EDT15738.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
acetyltransferase domain-containing protein
66_004_scaffold_38_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17123..17875
DNA (753bp) protein (251aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:EDT26031.1}; EC=3.1.11.2 {ECO:0000313|EMBL:EDT26031.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
xth; exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III n=2 Tax=Clostridium perfringens RepID=H7CVK2_CLOPF
66_004_scaffold_38_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17906..18442)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0TRB8_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17319.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_38_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18613..19347
DNA (735bp) protein (245aa)
Haloacid dehalogenase, IB family protein n=8 Tax=Clostridium perfringens RepID=H7CVK0_CLOPF
haloacid dehalogenase
Haloacid dehalogenase, IB family protein {ECO:0000313|EMBL:EDT70610.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_004_scaffold_38_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19699..20082
DNA (384bp) protein (128aa)
Mutator mutT-like protein n=7 Tax=Clostridium perfringens RepID=H7CVJ9_CLOPF
mutator mutT-like protein
Mutator mutT protein homolog {ECO:0000313|EMBL:EDT15729.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_38_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20145..20363
DNA (219bp) protein (73aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CVJ8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26048.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_38_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20396..21040)
DNA (645bp) protein (215aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CVJ7_CLOPF
hypothetical protein; K07149
Putative membrane protein {ECO:0000313|EMBL:EDT24422.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_38_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21316..21648
DNA (333bp) protein (111aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CVJ6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24369.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_38_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21683..22903)
DNA (1221bp) protein (407aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQJ7_CLOPF
sodium:dicarboxylate symporter family protein
Probable glutamate/ aspartate transporter {ECO:0000313|EMBL:BAB80873.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_38_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23395..24864
DNA (1470bp) protein (490aa)
Putative lysine-specific permease n=4 Tax=Clostridium perfringens RepID=Q0TRC5_CLOP1
lysine-specific permease; K03293 amino acid transporter, AAT family
Putative lysine-specific permease {ECO:0000313|EMBL:EDT25422.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_38_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24904..26103)
DNA (1200bp) protein (400aa)
Threonine dehydratase {ECO:0000313|EMBL:EIA17305.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EIA17305.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
tdcB; threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=3 Tax=Clostridium perfringens RepID=H7CVI7_CLOPF
Displaying items 1-30 of 119 in total

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