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66_004_scaffold_50

Search features with annotation key words

Displaying items 61-79 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_50_58
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(65661..66989)
DNA (1329bp) protein (443aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EDT73308.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EDT73308.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
dacF; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UYY3_CLOPF
66_004_scaffold_50_59
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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67185..67967
DNA (783bp) protein (261aa)
Putative comE operon protein 1 n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLQ7_CLOPF
comEA; competence protein ComE; K02237 competence protein ComEA
ComE operon protein {ECO:0000313|EMBL:BAB81826.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_50_60
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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68012..69043
DNA (1032bp) protein (344aa)
selD; selenide, water dikinase (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3]
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Selenide, water dikinase n=2 Tax=Clostridium perfringens RepID=Q0TNJ3_CLOP1
66_004_scaffold_50_61
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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69060..70448
DNA (1389bp) protein (463aa)
selA; selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Clostridium perfringens RepID=SELA_CLOP1
66_004_scaffold_50_62
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70449..72356
DNA (1908bp) protein (636aa)
Selenocysteine-specific translation elongation factor n=2 Tax=Clostridium perfringens RepID=Q0TNJ5_CLOP1
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EDT25261.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
selB; selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor
66_004_scaffold_50_63
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72543..72992
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYE0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16318.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_004_scaffold_50_64
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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73020..74375
DNA (1356bp) protein (452aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EDS79207.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDS79207.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-); K00599 [EC:2.1.1.-]
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLV9_CLOPF
66_004_scaffold_50_65
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(74440..75579)
DNA (1140bp) protein (380aa)
Prophage lambdaba04, site-specific recombinase, phage integrase family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLW0_CLOPF
Prophage lambdaba04, site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS79223.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
phage integrase site specific recombinase
66_004_scaffold_50_66
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75650..76105)
DNA (456bp) protein (152aa)
Phage protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RG72_CLOPF
Phage protein {ECO:0000313|EMBL:EDT27000.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
66_004_scaffold_50_67
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(76119..76865)
DNA (747bp) protein (249aa)
DNA-binding protein n=2 Tax=Clostridium perfringens RepID=H7CYV1_CLOPF
DNA-binding protein {ECO:0000313|EMBL:EIA16017.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Predicted transcriptional regulators
66_004_scaffold_50_68
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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77032..77247
DNA (216bp) protein (72aa)
Putative phage repressor n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQ26_CLOBO
Putative phage repressor {ECO:0000313|EMBL:EES49267.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Helix-turn-helix.
66_004_scaffold_50_69
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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77300..78148
DNA (849bp) protein (283aa)
Gp26 protein n=1 Tax=Clostridium phage phi3626 RepID=Q8SBM8_9CAUD
Putative phage regulatory protein {ECO:0000313|EMBL:AJG98905.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
66_004_scaffold_50_70
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78150..78407
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Clostridium acetobutylicum RepID=Q97HR4_CLOAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK79906.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
66_004_scaffold_50_71
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78428..78637
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUM0_CLOPF
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDS79217.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
DNA binding domain, excisionase family protein
66_004_scaffold_50_72
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

78637..78816
DNA (180bp) protein (60aa)
Gp28 protein n=2 Tax=root RepID=Q8SBM6_9CAUD
Conserved domain protein {ECO:0000313|EMBL:EDT22895.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_50_73
unknown

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78826..78921
DNA (96bp) protein (32aa)

This feature has no annotations

66_004_scaffold_50_74
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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78935..79480
DNA (546bp) protein (182aa)
Putative sigma factor n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPN4_CLOPF
Putative sigma factor {ECO:0000313|EMBL:EDT16380.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit; K03090 RNA polymerase sigma-B factor
66_004_scaffold_50_75
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

79630..80382
DNA (753bp) protein (251aa)
Gp34 protein n=2 Tax=root RepID=Q8SBM0_9CAUD
Gp34 protein {ECO:0000313|EMBL:EDT22917.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
66_004_scaffold_50_76
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

80392..81189
DNA (798bp) protein (266aa)
dnaB; replicative DNA helicase (EC:3.6.1.-); K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=2 Tax=root RepID=B1RA21_CLOPF
Replicative DNA helicase {ECO:0000313|EMBL:EDT22874.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 61-79 of 79 in total

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