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66_004_scaffold_65

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_65_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(171..1622)
DNA (1452bp) protein (484aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5Y9_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT24467.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein; K02027 multiple sugar transport system substrate-binding protein
66_004_scaffold_65_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2227..5094
DNA (2868bp) protein (956aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQU2_CLOPF
Putative enterotoxin {ECO:0000313|EMBL:EDT15677.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
entA; enterotoxin; K11059 probable enterotoxin A
66_004_scaffold_65_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5308..6243)
DNA (936bp) protein (312aa)
Putative type II restriction enzyme HphI n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRL8_CLOPF
Putative type II restriction enzyme HphI {ECO:0000313|EMBL:EDT15684.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
66_004_scaffold_65_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6537..7304)
DNA (768bp) protein (256aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQU4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27514.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
66_004_scaffold_65_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7603..8223)
DNA (621bp) protein (207aa)
Conserved domain protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5Y4_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT24451.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
66_004_scaffold_65_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9279..9743
DNA (465bp) protein (155aa)
Transcription elongation factor GreA n=10 Tax=Clostridium perfringens RepID=H7CVU5_CLOPF
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_65_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10047..10355)
DNA (309bp) protein (103aa)
Putative alpha-N-acetylgalactosaminidase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRM2_CLOPF
Putative alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:EDT15710.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sialidase-like protein
66_004_scaffold_65_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10682..14815)
DNA (4134bp) protein (1378aa)
Putative alpha-N-acetylgalactosaminidase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQG0_CLOPF
Putative alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:EDT24449.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
sialidase-like protein
66_004_scaffold_65_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15073..16818
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REK6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27593.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
66_004_scaffold_65_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17272..21339)
DNA (4068bp) protein (1356aa)
Beta-galactosidase {ECO:0000313|EMBL:EDS79959.1}; EC=3.2.1.23 {ECO:0000313|EMBL:EDS79959.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
beta-galactosidase; K01190 beta-galactosidase [EC:3.2.1.23]
Beta-galactosidase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQF8_CLOPF
66_004_scaffold_65_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21749..22936)
DNA (1188bp) protein (396aa)
FliB family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5X9_CLOPF
FliB family protein {ECO:0000313|EMBL:EDT24379.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
FliB family protein
66_004_scaffold_65_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23303..24268)
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5X8_CLOPF
dihydrouridine synthase
66_004_scaffold_65_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24372..25742)
DNA (1371bp) protein (457aa)
MATE efflux family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5X7_CLOPF
MATE efflux family protein {ECO:0000313|EMBL:EDT24355.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
66_004_scaffold_65_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26093..26434)
DNA (342bp) protein (114aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CVV2_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17177.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_65_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26446..28362)
DNA (1917bp) protein (639aa)
Oligopeptide transporter, OPT family n=3 Tax=Clostridium perfringens RepID=Q0TR12_CLOP1
OPT family oligopeptide transporter
Uncharacterized protein {ECO:0000313|EMBL:BAB80984.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_65_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28990..32505)
DNA (3516bp) protein (1172aa)
nagK; hyaluronidase; K01197 hyaluronoglucosaminidase [EC:3.2.1.35]
Putative hyaluronoglucosaminidase n=1 Tax=Clostridium perfringens F262 RepID=H7CVV4_CLOPF
Putative hyaluronoglucosaminidase {ECO:0000313|EMBL:EIA17179.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_65_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32737..32889)
DNA (153bp) protein (51aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CVV5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24370.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_65_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33156..38222)
DNA (5067bp) protein (1689aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKW1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80987.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_65_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38671..40059)
DNA (1389bp) protein (463aa)
Probable transmembrane protein n=2 Tax=Clostridium perfringens RepID=Q8XKW0_CLOPE
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:BAB80988.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_65_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40478..41227
DNA (750bp) protein (250aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5X1_CLOPF
transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT24393.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_65_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41340..42521)
DNA (1182bp) protein (394aa)
Pyrimidine nucleoside transporter n=5 Tax=Clostridium perfringens RepID=Q8XKV8_CLOPE
pyrimidine nucleoside transporter; K11535 nucleoside transport protein
Nucleoside transporter, NupC family {ECO:0000313|EMBL:EDT24472.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_65_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43097..44803)
DNA (1707bp) protein (569aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REI7_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT27599.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
66_004_scaffold_65_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44848..45273)
DNA (426bp) protein (142aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STF2_CLOPS
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABG86925.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_004_scaffold_65_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45558..46655)
DNA (1098bp) protein (366aa)
S41 family peptidase n=1 Tax=Clostridium perfringens F262 RepID=H7CVW2_CLOPF
S41 family peptidase {ECO:0000313|EMBL:EIA17187.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
S41 family peptidase
66_004_scaffold_65_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46988..47449
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5W6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24440.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
66_004_scaffold_65_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47721..48332)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V303_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT71864.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_004_scaffold_65_27
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48391..49938)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum Af84 RepID=S8CRK4_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KEI98714.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
hypothetical protein
66_004_scaffold_65_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50189..50299)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum Af84 RepID=S8CRK4_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KEI98714.1}; TaxID=1379740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum A2B3 87.;"
66_004_scaffold_65_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50287..50772)
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=S8D2I8_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO84999.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
66_004_scaffold_65_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50772..50993)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=S8BMN9_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO86154.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
Displaying items 1-30 of 41 in total

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