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66_004_scaffold_72

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Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_72_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(74..823)
DNA (750bp) protein (250aa)
Putative transcriptional activator tipA n=2 Tax=Clostridium perfringens RepID=Q0TU99_CLOP1
transcriptional activator tipA
MerR-family transcriptional regulator {ECO:0000313|EMBL:EDT28056.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_72_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(989..2446)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNI8_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80051.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_72_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2572..3369)
DNA (798bp) protein (266aa)
Amidinotransferase family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V0H2_CLOPF
Amidinotransferase family protein {ECO:0000313|EMBL:EDT72725.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
66_004_scaffold_72_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3600..5774)
DNA (2175bp) protein (725aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EDS79867.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDS79867.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-); K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase RecQ n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTX3_CLOPF
66_004_scaffold_72_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5823..6299)
DNA (477bp) protein (159aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
methylated-DNA-protein-cystein methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7U5_CLOPF
66_004_scaffold_72_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6617..8203)
DNA (1587bp) protein (529aa)
aspartate aminotransferase; K09758 aspartate 4-decarboxylase [EC:4.1.1.12]
L-aspartate beta-decarboxylase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNW8_CLOPF
L-aspartate beta-decarboxylase {ECO:0000313|EMBL:EDT16722.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_72_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8514..9863)
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTX6_CLOPF
TldD/PmbA family protein {ECO:0000313|EMBL:EIA18445.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
pmbA; TldD/PmbA family protein; K03592 PmbA protein
66_004_scaffold_72_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9879..10457)
DNA (579bp) protein (193aa)
TldD/PmbA family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7U2_CLOPF
TldD/PmbA family protein {ECO:0000313|EMBL:EDT23674.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
tldD; TldD protein; K03568 TldD protein
66_004_scaffold_72_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10448..11266)
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTX7_CLOPF
TldD/PmbA family protein {ECO:0000313|EMBL:EDT16716.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
tldD; TldD protein; K03568 TldD protein
66_004_scaffold_72_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11538..12842
DNA (1305bp) protein (435aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDT5_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT28067.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
66_004_scaffold_72_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13185..13589)
DNA (405bp) protein (135aa)
Amino acid transporter n=1 Tax=Clostridium perfringens F262 RepID=H7CSC0_CLOPF
amino acid transporter; K03294 basic amino acid/polyamine antiporter, APA family
Probable amino acid transporter {ECO:0000313|EMBL:BAB80043.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_72_12
unknown

Not on your lists

13777..13887
DNA (111bp) protein (37aa)

This feature has no annotations

66_004_scaffold_72_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13950..14567)
DNA (618bp) protein (206aa)
Amino acid permease family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP58_CLOPF
Amino acid transporter {ECO:0000313|EMBL:EIA18442.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
amino acid permease
66_004_scaffold_72_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14758..15690)
DNA (933bp) protein (311aa)
Putative membrane protein n=3 Tax=Clostridium perfringens RepID=B1BNX3_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT16724.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
66_004_scaffold_72_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16176..16748)
DNA (573bp) protein (191aa)
xpt; xanthine phosphoribosyltransferase (EC:2.4.2.22); K03816 xanthine phosphoribosyltransferase [EC:2.4.2.22]
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Xanthine phosphoribosyltransferase 1 n=8 Tax=Clostridium perfringens RepID=XPT1_CLOP1
66_004_scaffold_72_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17307..18104)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJU9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79892.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
66_004_scaffold_72_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18644..21301
DNA (2658bp) protein (886aa)
cation-transporting ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
Cation-transporting ATPase, P-type n=1 Tax=Clostridium perfringens F262 RepID=H7CSB6_CLOPF
Cation-transporting ATPase, P-type {ECO:0000313|EMBL:EIA18438.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_72_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21398..22021
DNA (624bp) protein (208aa)
DedA family protein n=4 Tax=Clostridium perfringens RepID=H7CSB5_CLOPF
DedA family protein
DedA family protein {ECO:0000313|EMBL:EIA18437.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_72_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22214..22888)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CSB4_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDS79881.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
66_004_scaffold_72_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23207..23587
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP67_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86836.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_004_scaffold_72_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23714..24226)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RP68_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13896.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_72_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24250..24759)
DNA (510bp) protein (170aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
sipS; type I signal peptidase; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJV5_CLOPF
66_004_scaffold_72_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25126..25524
DNA (399bp) protein (133aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CSB0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13886.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_72_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25608..27008)
DNA (1401bp) protein (467aa)
glycolate oxidase subunit GlcD; K00104 glycolate oxidase [EC:1.1.3.15]
Putative glycolate oxidase, subunit GlcD n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUC0_CLOP1
Putative glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EDT72704.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_004_scaffold_72_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27010..28188)
DNA (1179bp) protein (393aa)
Electron transfer flavoprotein, alpha subunit/FixB family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWM9_CLOPF
Electron transfer flavoprotein, alpha subunit/FixB family protein {ECO:0000313|EMBL:EDT13883.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
electron transfer flavoprotein subunit alpha/FixB family protein; K03522 electron transfer flavoprotein alpha subunit
66_004_scaffold_72_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28201..28989)
DNA (789bp) protein (263aa)
Electron transfer flavoprotein beta-subunit n=1 Tax=Clostridium perfringens F262 RepID=H7CSA7_CLOPF
Electron transfer flavoprotein beta-subunit {ECO:0000313|EMBL:EIA18429.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
etfB; electron transfer flavoprotein beta-subunit; K03521 electron transfer flavoprotein beta subunit
66_004_scaffold_72_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29633..30319)
DNA (687bp) protein (229aa)
FCD domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CSA5_CLOPF
FCD domain-containing protein; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
FCD domain protein {ECO:0000313|EMBL:EDT13900.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_72_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30334..31899)
DNA (1566bp) protein (522aa)
MutS domain protein n=2 Tax=Clostridium perfringens RepID=B1BJW6_CLOPF
MutS domain protein {ECO:0000313|EMBL:EDT13888.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
MutS domain-containing protein
66_004_scaffold_72_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32051..33055)
DNA (1005bp) protein (335aa)
Putative lipase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNE1_CLOPF
Putative lipase {ECO:0000313|EMBL:EDT72664.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
lipase
66_004_scaffold_72_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33277..34875)
DNA (1599bp) protein (533aa)
Putative ABC transporter permease protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSA2_CLOPF
Putative ABC transporter permease protein {ECO:0000313|EMBL:EIA18424.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
ABC transporter permease; K01992 ABC-2 type transport system permease protein
Displaying items 1-30 of 55 in total

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