ggKbase home page

66_004_scaffold_81

Search features with annotation key words

Displaying items 1-30 of 45 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_81_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..106
DNA (105bp) protein (35aa)
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
dTDP-glucose 4,6-dehydratase n=2 Tax=Clostridium perfringens RepID=H7CT58_CLOPF
66_004_scaffold_81_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

267..1187
DNA (921bp) protein (307aa)
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTV2_CLOP1
66_004_scaffold_81_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1556..2203
DNA (648bp) protein (216aa)
Putative RNA polymerase sigma factor n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ4_CLOPF
RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EDT16803.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_81_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2602..4845
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V209_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT72109.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
66_004_scaffold_81_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4923..5939
DNA (1017bp) protein (339aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EDT16704.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EDT16704.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
galE; UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=2 Tax=Clostridium perfringens RepID=B1BNG0_CLOPF
66_004_scaffold_81_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6221..7165
DNA (945bp) protein (315aa)
galU; UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
UTP-glucose-1-phosphate uridylyltransferase n=6 Tax=Clostridium perfringens RepID=H7CSU4_CLOPF
66_004_scaffold_81_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7487..8179
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNQ0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16734.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
66_004_scaffold_81_trna_1
unknown

Not on your lists

8323..8395
DNA (73bp)
transferRNA Met
66_004_scaffold_81_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8762..9013
DNA (252bp) protein (84aa)
Cell wall binding repeat domain protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTU6_CLOP1
cell wall binding repeat-containing protein
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EIA18240.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_81_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9098..9592
DNA (495bp) protein (165aa)
Cell wall binding repeat-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSU6_CLOPF
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EIA18240.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
cell wall binding repeat-containing protein
66_004_scaffold_81_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9555..13439
DNA (3885bp) protein (1295aa)
Cell wall binding repeat domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNP9_CLOPF
cell wall binding repeat-containing protein
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:EIA18241.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_81_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13858..16056
DNA (2199bp) protein (733aa)
agaN; alpha-galactosidase; K07407 alpha-galactosidase [EC:3.2.1.22]
Alpha-galactosidase n=1 Tax=Clostridium perfringens F262 RepID=H7CSU8_CLOPF
Alpha-galactosidase {ECO:0000313|EMBL:EIA18242.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_81_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16208..16957)
DNA (750bp) protein (250aa)
sortase; K08600 sortase B [EC:3.4.22.70]
Sortase B n=3 Tax=Clostridium perfringens RepID=Q0TTU4_CLOP1
Sortase B {ECO:0000313|EMBL:EDT25141.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_81_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17196..17720
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000313|EMBL:EDT24946.1}; EC=3.4.21.89 {ECO:0000313|EMBL:EDT24946.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
signal peptidase type I; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-]
Signal peptidase I n=2 Tax=Clostridium perfringens RepID=B1R3T3_CLOPF
66_004_scaffold_81_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17774..18409
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V216_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18245.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_004_scaffold_81_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18457..19188
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNP4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT25107.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
66_004_scaffold_81_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19191..19817
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDD2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT28024.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
66_004_scaffold_81_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19834..21678
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN21_CLOPE
von Willebrand factor A
Uncharacterized protein {ECO:0000313|EMBL:BAB80223.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_81_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21957..22673
DNA (717bp) protein (239aa)
DNA-binding response regulator n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V220_CLOPF
DNA-binding response regulator {ECO:0000313|EMBL:EDT72117.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
DNA-binding response regulator
66_004_scaffold_81_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22678..23973
DNA (1296bp) protein (432aa)
Sensor histidine kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNP0_CLOPF
sensor histidine kinase
Sensor histidine kinase {ECO:0000313|EMBL:EDT16662.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_81_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24151..24957
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CSV7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18251.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_004_scaffold_81_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25326..25769
DNA (444bp) protein (148aa)
hypothetical protein; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
PTS system, L-Ascorbate family, IIA component n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3S6_CLOPF
PTS system, L-Ascorbate family, IIA component {ECO:0000313|EMBL:EDT24944.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_81_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25944..26216
DNA (273bp) protein (91aa)
PTS system lactose/cellobiose-specific transporter subunit IIB; K02822 PTS system, ascorbate-specific IIB component [EC:2.7.1.69]
PTS system, lactose/cellobiose-specific IIB component n=4 Tax=Clostridium perfringens RepID=Q0TTT4_CLOP1
Uncharacterized protein {ECO:0000313|EMBL:BAB80228.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_81_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26257..27528
DNA (1272bp) protein (424aa)
PTS system, L-Ascorbate family, IIC component n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V225_CLOPF
PTS system, L-Ascorbate family, IIC component {ECO:0000313|EMBL:EDT72110.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ulaA; PTS system ascorbate-specific transporter subunit IIC; K03475 PTS system, ascorbate-specific IIC component
66_004_scaffold_81_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27808..28254)
DNA (447bp) protein (149aa)
MarR family transcriptional regulator n=5 Tax=Clostridium perfringens RepID=H7CSW2_CLOPF
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:EIA18256.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_81_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28577..30874
DNA (2298bp) protein (766aa)
Probable ABC transporter n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XN12_CLOPE
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
Probable ABC transporter {ECO:0000313|EMBL:BAB80232.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_81_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30867..32723
DNA (1857bp) protein (619aa)
ABC transporter n=2 Tax=Clostridium perfringens RepID=H7CSW4_CLOPF
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT25037.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
66_004_scaffold_81_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33238..34119
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BNB6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16650.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
66_004_scaffold_81_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34374..35423
DNA (1050bp) protein (350aa)
Transporter, auxin efflux carrier family n=7 Tax=Clostridium perfringens RepID=Q0TTS7_CLOP1
auxin efflux carrier family protein
Probable malate permease {ECO:0000313|EMBL:BAB80235.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_81_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35750..36748
DNA (999bp) protein (333aa)
D-lactate dehydrogenase; K03778 D-lactate dehydrogenase [EC:1.1.1.28]
Putative D-lactate dehydrogenase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R3R7_CLOPF
Putative D-lactate dehydrogenase {ECO:0000313|EMBL:EDT25030.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Displaying items 1-30 of 45 in total

View Taxonomy